Query= MSMg01no295_p22.b1 MSMg01no295_p22.b1 CHROMAT_FILE:
MSMg01no295_p22.b1 PHD_FILE: MSMg01no295_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:04 2005
(319 letters)
>mm_chr13_46466584_46467302
Length = 719
Score = 563 bits (291), Expect = e-165
Identities = 310/317 (97%), Gaps = 2/317 (0%)
Strand = Plus / Plus
Query: 5 gaattcatgagggcagtcaagaaggatcagccaggtgtggtacttggtactgccaacatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgagggcagtcaagaaggatcagccaggtgtggtacttggtactgccaacatg 264
Query: 65 gtaactggaccacatcatggaaaggagagggtgtttgtctatcttcttctttttataatg 124
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 265 gtaattggaccacatcatggaaaggagagggtgtttgtctatcttcttcttttttttatg 324
Query: 125 gagtttcacatagcctaggctagcttccaactttctatgtagacaaggatgactttcaat 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagtttcacatagcctaggctagcttccaactttctatgtagacaaggatgactttcaat 384
Query: 185 tcctgatctttatgtctctaccccaataatgttggaatggc--gcatccatacataccac 242
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 385 tcctgatctttatgtctctaccccaataatgttggaatggcaagcgtccatacataccac 444
Query: 243 acacatctattgttttcttcttaggtagctctggggattgggccaaggtcttcctgcact 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acacatctattgttttcttcttaggtagctctggggattgggccaaggtcttcctgcact 504
Query: 303 ctcagagagcactctac 319
|||||||||||||||||
Sbjct: 505 ctcagagagcactctac 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no295_p22.g1 MSMg01no295_p22.g1 CHROMAT_FILE:
MSMg01no295_p22.g1 PHD_FILE: MSMg01no295_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:04 2005
(293 letters)
>mm_chr13_46635574_46636265
Length = 692
Score = 499 bits (258), Expect = e-146
Identities = 289/312 (92%), Gaps = 21/312 (6%)
Strand = Plus / Minus
Query: 1 cagaacagccagggttacccagagaaatccggact--------------------caaac 40
|||||||||||||| |||||||||||||||||||| |||||
Sbjct: 558 cagaacagccagggctacccagagaaatccggactcaaacaaacaaacaaacaaacaaac 499
Query: 41 aaacaaacggaagtaacacagttcaaatctgtaggctacaccttaactcagtgctaaaaa 100
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 498 aaacaaacggaagtaacacagttcaaatctgtaggctacaccttaactcaatgctaaaaa 439
Query: 101 ataccatttttttatttgaacaggagatttgatgtaagaataaatggtatgtttaaactg 160
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atacca-ttttttatttgaacaggagatttgatgtaagaataaatggtatgtttaaactg 380
Query: 161 ccctgaacataaagaagggatttaaaatgacttaagtatttaatactatggtaatggtaa 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccctgaacataaagaagggatttaaaatgacttaagtatttaatactatggtaatggtaa 320
Query: 221 agctccaaagtctacatcttcccagcccctttccaggtcttgctagttagcccagtccag 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agctccaaagtctacatcttcccagcccctttccaggtcttgctagttagcccagtccag 260
Query: 281 cattgaattctg 292
||||||||||||
Sbjct: 259 cattgaattctg 248
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 692
Length adjustment: 9
Effective length of query: 284
Effective length of database: 683
Effective search space: 193972
Effective search space used: 193972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
