NNNNNNNNNGGTNNNNNNNNNTTGGGGGACCGANNNNNNNCCGCGGCTCC
CCGCCCGAAGCTAAGGGAAGGCNTGGAGGAGGCCGAATCAGGACCAGNAN
GNGNNNNNGGGGNNTTACCAAAAAAAGGGGGGNGNNNNGGGGGANNNNNG
GNNANNNNNNAGNGGGNGTTTTTAGCCCCCAAAAAGGGGGGGAGGGNAGN
GANAAGGNNNANNAAGNNAGGNNNNGNAAGGNAGAGNNGNNNAANANAAG
GGNGGGNGGGNNGGAGAGNGANANNGGGAGAGAGNGAANNNNGGAAGGNA
AGAANNANAATTTTAGGNAANAAAANAAAANAAAANAAAAGAAAAGAGGG
AAAAAAAGAAGAAGAAGAAAAAAAAATTTTTATGTTTATAGAAAANAAAA
NAAAAGAAAAAAANNGAAAAAATTTGATATCCCGCCCCCCACCCCCGTCT
TTCCGGAAGTGACGTTAATAGGGTACAGGGAAACGAGAATAAAAAAACAG
CGCGGAGGGAGAGAGGTTTCATACCAAGACAGCGCGGGGGGGGCGAGGGA
GAAACGGTTAAAGCGCAAGGAAAGAGGCAAGTTGTAGGAAGGCGGGCACG
GTGATAGGGGACAGGGATTATTAGAGGGCCGGGTAGGGGAAGGGTATGGA
GAAAGGTATGAAAGGGCGTAGGAGTATGGGAGGTGGGGGGGAGAGGGAAG
AGAGGAGAGAGGTGATTTTTTTTGTAAGAAAAGGGAGGGAAAAGGCGGGT
AAAAGAGGGGGAGGGAGAGGGGGGG

CGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGCTGTCTGGGTGACCTTTGGTTACAC
AATAGCGGGCGCAATAGCCACCACATATGAATTGATGGCAGTGACAAGGT
CATCAAGCCAGTCTTTCAAGCCAGAGCCCCTAATACAAGGCCTGCTGGTT
TGAGAGTGATACCTGAGAGAGTCAACTCTGACATGTAAGACTCACAATTT
TAGGCAACAAAACAAAACAAAACAAAACAAAACACCCAAAAAAATAACAA
CAACAAAAAAAAAGAAAGAAAAGAATAGAAAACAAAACAAAACAAAAAAA
CCCAAAAAACCTGATATATGTTTTTTATTTTCTTCTTTCCTGAATTGTCT
TTAATAGGGTACAGGGAAATGTGATTATACAATCAGCTCAAATTGAATCA
TCTTTCATACCAAGACATCTCTTGGGGTTCGATGTTGACACTTTTAAATC
CCCAGGAAAATCTCCTGTTGCAGGAGCCATCTCACGGTATCATGGTATCA
GGATTATTATAGTTCTGGGAGGGGAAGGCTATGGAGATAGTTTTGAAAGC
TCTTAGCACTAGTGTCTTTGGGGTGAACGTTAATTATTAATCAGTGAACC
ACTTGGAAGTAAGTCTGTCAATGCTTGTAACGTGCGTGAGGGTCAGGGAG
CCAGGGGTTAGCCATATGTTGACCGAGTAAAATGTACACAGCTGTTAAAG
CCCCTTTCCGGCACTGG

Query= MSMg01no296_g05.g1 MSMg01no296_g05.g1 CHROMAT_FILE:
MSMg01no296_g05.g1 PHD_FILE: MSMg01no296_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:34 2005
         (512 letters)



>mm_chr13_109285821_109286732
          Length = 912

 Score =  797 bits (412), Expect = 0.0
 Identities = 478/512 (93%), Gaps = 22/512 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   agctgtctgggtgacctttggttacacaatagcgggcgcaatagccaccacatatgaatt 60
           |||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||
Sbjct: 201 agctgtctgggtgacctttggttacacaatagcgtgcacaatagccaccagatatgaatt 260

                                                                       
Query: 61  gatggcagtgacaaggtcatcaagccagtctttcaagccagagcccctaatacaaggcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatggcagtgacaaggtcatcaagccagtctttcaagccagagcccctaatacaaggcct 320

                                                                       
Query: 121 gctggtttgagagtgatacctgagagagtcaactctgacatgtaagactcacaattttag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 gctggtttgagagtgatacctgagagagtcaactctgacatgtaagactaacaattttag 380

                                                                       
Query: 181 gcaacaaaacaaaacaaaacaaaacaaaacacccaaaaaaataacaacaacaaaaaaaaa 240
           ||    ||||||||||||||||||||||| |  |||||||  |||||||||||||     
Sbjct: 381 gc----aaacaaaacaaaacaaaacaaaaaagtcaaaaaa--aacaacaacaaaa----- 429

                                                                       
Query: 241 gaaagaaaagaatagaaaacaaaacaaaacaaaaaaacccaaaaaacctgatatatgttt 300
            |||||||||          ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 430 -aaagaaaag----------aaaacaaaacaaaaaaacccaaaaaacctgatatatgatt 478

                                                                       
Query: 301 tttattttcttctttcctgaattgtctttaatagggtacagggaaatgtgattatacaat 360
           |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 479 tttattttcttcttccctgaattgtctttaatagggtacaggaaaatgtgattatacaat 538

                                                                       
Query: 361 cagctcaaattgaatcatctttcataccaagacatctcttggggttcgatgttgacactt 420
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 539 cagctcaaattgaatcatctttcataccaagacatctcttgtggttcgatgttgacactt 598

                                                                       
Query: 421 ttaaatccccaggaaaatctcctgttgcaggagccatctcacggtatcatggtatcagga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 599 ttaaatccccaggaaaatctcctgttgcaggagccatctcacggtatcatggtatcatga 658

                                           
Query: 481 ttattatagttctgggaggggaaggctatgga 512
           ||||||||||||||||||||||||||||||||
Sbjct: 659 ttattatagttctgggaggggaaggctatgga 690


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space:   452804
Effective search space used:   452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)