Query= MSMg01no298_b08.b1 MSMg01no298_b08.b1 CHROMAT_FILE:
MSMg01no298_b08.b1 PHD_FILE: MSMg01no298_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:41 2005
(607 letters)
>mm_chr13_3371527_3372533
Length = 1007
Score = 696 bits (360), Expect = 0.0
Identities = 521/590 (88%), Gaps = 30/590 (5%)
Strand = Plus / Plus
Query: 47 cccattaattggggtactctactgtggcaagggtacttgc-------------catgtct 93
||||||| |||| ||||| ||||||||| ||| |||||| |||||||
Sbjct: 219 cccattagttggtgtactagactgtggcagggggacttgccttgtctaacattcatgtct 278
Query: 94 taacttgaaaaccagaaagtcagttgtgcatgtacaagtctctttcttccaagtaagatg 153
||||||| ||||||||||||| ||| || ||||||||||||| |||||||||||||||
Sbjct: 279 taacttgtgaaccagaaagtcacttgcccacgtacaagtctcttccttccaagtaagatg 338
Query: 154 tcagttcccagggaggcctcgagaacttatactttactcactcacaccctactcaaaata 213
|||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tcagttccgtgggaggccttgggaacttatactttactcactcacaccctactcaaaata 398
Query: 214 gaagtctgg-ttcgaagtagtctctgcactgaatcggtggtgcgggtgtctctcttttgt 272
|||||| || ||| ||||||||| | ||||||||| |||||| |||||||||||||||||
Sbjct: 399 gaagtc-ggattccaagtagtctgtacactgaatcagtggtgtgggtgtctctcttttgt 457
Query: 273 tggggtgcgggg---gtccgtccccagggcagcttctaagagcaaatgccagaaaagtgt 329
||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tggggggcggggggtgtccatccccagggcagcttctaagagcaaatgccagaaaagtgt 517
Query: 330 atacatgggtttgtgcaggaaatgctgctgggtggtcagtttgggtccaagcctattgca 389
|||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||
Sbjct: 518 atacatgggtgggtgcaggaaatactgctgggtggtcagtttggatccaagcatattgca 577
Query: 390 gataactatagaacaaaggaagc--ttctat---------tc-tgattggtttccgagga 437
||||||||||||||||||||||| ||| || || |||||||||||||||||
Sbjct: 578 gataactatagaacaaaggaagcagttcgattggcctctctcgtgattggtttccgagga 637
Query: 438 cacatccaacaagaatatgtagtcaattctggcaataatggcagaaacaagctatgagaa 497
|||||||||| |||||||||| |||||||||||| ||||||||||||| || ||||||||
Sbjct: 638 cacatccaacgagaatatgtaatcaattctggcagtaatggcagaaactagatatgagaa 697
Query: 498 agtgtccttataatagtagttaacagcacaaaatggcaggctagccaggtaagaggttac 557
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 698 agtgtccttataatagtagttaacagcaccaaatggcaggctagccaggtaagaggttac 757
Query: 558 ctaggccttatctaatctgaagtaggccttcacattccatctaggcctta 607
|||| ||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 758 ctagcccttatctaatctgacgtaagccttcacattccatctaggcctta 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_b08.g1 MSMg01no298_b08.g1 CHROMAT_FILE:
MSMg01no298_b08.g1 PHD_FILE: MSMg01no298_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:41 2005
(497 letters)
>mm_chr18_40467476_40468371
Length = 896
Score = 366 bits (189), Expect = e-105
Identities = 231/245 (94%), Gaps = 1/245 (0%)
Strand = Plus / Minus
Query: 1 tctgaactcactgtcctttcaggtccacatttgctctggctctggcaactgactgaacca 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 444 tctgaactcactgtcctttcaggtccacctttgctctggctctggcaactgactgaacca 385
Query: 61 aacaattaggctcatacctagaactttggaaatggtaatggagttgataacacaccctaa 120
||||| |||||||||||||||| ||| | |||||||||||||||||| ||||||| ||||
Sbjct: 384 aacaa-taggctcatacctagatcttcgaaaatggtaatggagttgaaaacacactctaa 326
Query: 121 cagaaagaggaatgctccactcactagtacactttcactagaagcctcaccctgtcagca 180
|||||||||||| |||||||||||||| | |||||||||||||||||| ||||| |||||
Sbjct: 325 cagaaagaggaaggctccactcactagaagactttcactagaagcctcgccctgccagca 266
Query: 181 gtttaggaatttgtaaagccaatctggacaatatttaaatggtttggaatttctacttca 240
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 265 gtttaggaatttgtaaagccaatctggacaatatttacatgatttggaatttctacttca 206
Query: 241 tgttt 245
|||||
Sbjct: 205 tgttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 896
Length adjustment: 10
Effective length of query: 487
Effective length of database: 886
Effective search space: 431482
Effective search space used: 431482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|