Query= MSMg01no300_c14.b1 MSMg01no300_c14.b1 CHROMAT_FILE:
MSMg01no300_c14.b1 PHD_FILE: MSMg01no300_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:16 2005
(367 letters)
>mm_chr13_15799033_15799799
Length = 767
Score = 656 bits (339), Expect = 0.0
Identities = 360/367 (98%)
Strand = Plus / Minus
Query: 1 ttcaatcagttggggaagcctggaggtacctcttgcttttgaacagcaccctcccccctt 60
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 567 ttcaatcagttggggaagcctggaggtacctcttgcttttgttctgcaccctcccccctt 508
Query: 61 cctttggtcagattcaatttccacttggaaagcacagctctctagataagtaggctcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cctttggtcagattcaatttccacttggaaagcacagctctctagataagtaggctcagt 448
Query: 121 tctcaggaactccctgagaggagaagttacagcactcttcagaactgggcagaaattcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tctcaggaactccctgagaggagaagttacagcactcttcagaactgggcagaaattcac 388
Query: 181 tcctgccacctaccgcccaaggtgactcacatatcagtagacaaacactggttgcttccc 240
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 387 tcctgccacctaccgcccaaggtgactcgcatatcagtagacaaacactggctgcttccc 328
Query: 241 aagcctgttttctctagtcagcaggatcctgacagcagagagcgattcctcccaaggctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aagcctgttttctctagtcagcaggatcctgacagcagagagcgattcctcccaaggctg 268
Query: 301 tcatgaaaagtctcagttaagcatatccaaaagcagccacagtaggacatgcagaccttg 360
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 267 tcatgaaaagtctcggttaagcatatccaaaagcagtcacagtaggacatgcagaccttg 208
Query: 361 aaccctt 367
|||||||
Sbjct: 207 aaccctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no300_c14.g1 MSMg01no300_c14.g1 CHROMAT_FILE:
MSMg01no300_c14.g1 PHD_FILE: MSMg01no300_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:16 2005
(196 letters)
>mm_chr13_15694038_15694633
Length = 596
Score = 342 bits (177), Expect = 7e-99
Identities = 189/193 (97%), Gaps = 2/193 (1%)
Strand = Plus / Plus
Query: 1 attgcagggtctgtgcttttgtctgttggaaaaaatattgtatt-ttcttcagggggctt 59
||||||||||||||||| |||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 201 attgcagggtctgtgctcttgtctgttggaaaaaatatcgtattatt-ttcagggggctt 259
Query: 60 ttgtttcattattttaagtagggtccaacaagaggattatgtctcacttttctgtgttcg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttgtttcattattttaagtagggtccaacaagaggattatgtctcacttttctgtgttcg 319
Query: 120 tagttgagttatatcaacttgcagttacagaataaaggtaggtgtgtgtgtgtgtgtgtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tagttgagttatatcaacttgcagttacagaataaaggtaggtgtgtgtgtgtgtgtgtg 379
Query: 180 tgtgtgtgtgtgt 192
|||||||||||||
Sbjct: 380 tgtgtgtgtgtgt 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 596
Length adjustment: 8
Effective length of query: 188
Effective length of database: 588
Effective search space: 110544
Effective search space used: 110544
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
