Query= MSMg01no302_a11.b1 MSMg01no302_a11.b1 CHROMAT_FILE:
MSMg01no302_a11.b1 PHD_FILE: MSMg01no302_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:34 2005
(319 letters)
>mm_chr13_9270009_9270723
Length = 715
Score = 572 bits (296), Expect = e-168
Identities = 307/312 (98%), Gaps = 4/312 (1%)
Strand = Plus / Plus
Query: 5 gaattcagagagctgcctccctctgcctcccaagtgctgggatttaagatgtgagctccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagagagctgcctccctctgcctcccaagtgctgggatttaagatgtgagctccc 264
Query: 65 atgctgggatggctgcagatattttagtcaaagagtcttcctgcctcagcctctcaatag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgctgggatggctgcagatattttagtcaaagagtcttcctgcctcagcctctcaatag 324
Query: 125 ctggagatatagatgcatagtactgtgctgggagtccagttctgaattaaattttgcacg 184
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 325 ctggagatatagatgcatagtactgtgctgggagtc--g--ctgaattaaattttgcacg 380
Query: 185 tgcctatgacacaggttggagacctgatgggagaagatgaaggaagatgttagtaaaaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcctatgacacaggttggagacctgatgggagaagatgaaggaagatgttagtaaaaca 440
Query: 245 gagacacaagtagttgtggctcctcatgaccatggaaaattctgcagctgaacatagatg 304
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagacacaagtagttggggctcctcatgaccatggaaaattctgcagctgaacatagatg 500
Query: 305 tacaggagagaa 316
||||||||||||
Sbjct: 501 tacaggagagaa 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 715
Length adjustment: 9
Effective length of query: 310
Effective length of database: 706
Effective search space: 218860
Effective search space used: 218860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_a11.g1 MSMg01no302_a11.g1 CHROMAT_FILE:
MSMg01no302_a11.g1 PHD_FILE: MSMg01no302_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:34 2005
(287 letters)
>mm_chr13_9430970_9431656
Length = 687
Score = 547 bits (283), Expect = e-160
Identities = 286/287 (99%)
Strand = Plus / Minus
Query: 1 attcttttaaatgagaggcagttccatggaaaatgtggctcagaaagttcagcccatgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 attcttttaaatgagaggcagttccatggaaaatgtggctcagaaagttcagcccatgag 286
Query: 61 caaaatacacgcatacttttatgaggtaactgtcagacctcagtatctggttctcactcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 caaaatacacgcatacttttatgaggtaactgtcagacctcagtatctggttctcactcc 226
Query: 121 aagtcttaaagcatgctcctgtggtgagatttagaaaactggtactttcactgcttcacc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 225 aagtcttaaagcatgctcctgtggtgagatttagaaaactggtactttcactgctttacc 166
Query: 181 aagcatattccaagtaaaattaaccttttcttccttaaattatgtgattcacagtatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 aagcatattccaagtaaaattaaccttttcttccttaaattatgtgattcacagtatgaa 106
Query: 241 aatgaatttgatggactgatactactgtctaaaccttgctcaagaca 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 aatgaatttgatggactgatactactgtctaaaccttgctcaagaca 59
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
