Query= MSMg01no302_m11.b1 MSMg01no302_m11.b1 CHROMAT_FILE:
MSMg01no302_m11.b1 PHD_FILE: MSMg01no302_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:30 2005
(354 letters)
>mm_chr13_5600209_5600962
Length = 754
Score = 659 bits (341), Expect = 0.0
Identities = 350/353 (99%)
Strand = Plus / Plus
Query: 1 cttaaaggactgatattaatgtgaggcacattttctttgcaagaaatatttaattaaatt 60
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 cttaaaggactgatattaatgtgaggcacattttctttgcaagtcatatttaattaaatt 260
Query: 61 gcgaactgatgaattacatttttaaaattaacagactgttgttgttttgtaacccaattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgaactgatgaattacatttttaaaattaacagactgttgttgttttgtaacccaattg 320
Query: 121 acaaaaatactgtaaagaatttggtgaaattctgtgacattatgaaatatttgtttccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaaaatactgtaaagaatttggtgaaattctgtgacattatgaaatatttgtttccaa 380
Query: 181 aaccttgatcaagaaaataaagcatcaaacaagatttgttcaattccagtgcccttaatt 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 aaccttgatcaagaaaataaagcatcaaacgagatttgttcaattccagtgcccttaatt 440
Query: 241 acattgggtgcctttaattccagtaggtggaaccatggggaagaggaattcaaggtcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acattgggtgcctttaattccagtaggtggaaccatggggaagaggaattcaaggtcaac 500
Query: 301 cactacaacataaaaagtttggggccagcctgtactacatgacacccatatca 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cactacaacataaaaagtttggggccagcctgtactacatgacacccatatca 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_m11.g1 MSMg01no302_m11.g1 CHROMAT_FILE:
MSMg01no302_m11.g1 PHD_FILE: MSMg01no302_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:30 2005
(283 letters)
>mm_chr13_5708292_5708975
Length = 684
Score = 489 bits (253), Expect = e-143
Identities = 277/285 (97%), Gaps = 3/285 (1%)
Strand = Plus / Minus
Query: 1 ccatgaatttcaaatgccaaatagtgcaaaggcacactaaaacaggcaataaatttaagg 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 484 ccatgaatttcaaatgccaaatagtgcaaaggcacactaaaacagacaataaatttaagg 425
Query: 61 ccccaatcccagcactggatatctcttccttatagcatttacttattaacagcacacaca 120
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 424 gcccaatcccagcactggatatctcttccttatagcatttactttttaacagcacacaca 365
Query: 121 ggaccggctgtgac-agggcagtttgcatcactcctctctacctgtgca-tcctggctct 178
|||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 364 ggacgggctgtgacaagggcagtttgcatcactcctctctacctgtg-attcctggctct 306
Query: 179 tactggctggctctttctccatgtcttctctaagactcagagatcctcacacctaaacat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 305 tactggctggctctttctccatgtcttctctaagactcagagatcctcacacctagacat 246
Query: 239 ccttttcttttgtagcctcagtgatgatgctggatggttggaagt 283
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ccttttcttttgtagcctcagtgatgatgctggatggttggaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 684
Length adjustment: 9
Effective length of query: 274
Effective length of database: 675
Effective search space: 184950
Effective search space used: 184950
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
