Query= MSMg01no303_o16.b1 MSMg01no303_o16.b1 CHROMAT_FILE:
MSMg01no303_o16.b1 PHD_FILE: MSMg01no303_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:57 2005
(691 letters)
>mm_chr13_76573025_76574115
Length = 1091
Score = 1307 bits (676), Expect = 0.0
Identities = 685/688 (99%), Gaps = 2/688 (0%)
Strand = Plus / Minus
Query: 5 gaattccatagggtac-caagtaaatgctaaattcataggaaatgtccattagctccttt 63
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 gaattccataggg-acaaaagtaaatgctaaattcataggaaatgtccattagctccttt 833
Query: 64 gattcattactaaagtattatgaaaagattactaattataatattcaatatcaccttttg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 gattcattactaaagtattatgaaaagattactaattataatattcaatatcaccttttg 773
Query: 124 aaaagtatagtttgctggtcccaggcttctcctgttttactttagggactgttgggtcat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 aaaagtatagtttgctggtcccaggcttctcctgttttactttagggactgttgggtcat 713
Query: 184 gcagaagttgggaagaaggtttacagtggacatcttcccttgacaggctcactgaaagac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gcagaagttgggaagaaggtttacagtggacatcttcccttgacaggctcactgaaagac 653
Query: 244 agcaaacaagcctacaaatgcagaagttgactttagaaattcacattctcccagaacctt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agcaaacaagcctacaaatgcagaagttgactttagaaattcacattctcccagaacctt 593
Query: 304 gttctcaggtgctagtcagagccttaacttaactaaaccttacttggtgatgctgcacta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gttctcaggtgctagtcagagccttaacttaactaaaccttacttggtgatgctgcacta 533
Query: 364 atctgaaaaccatggttgatatgtagatccaaatgctcacattggtattgtgagtgtact 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 atctgaaaaccatggttgatatgtagatccaaatgctcacattggtattgtgagtgtact 473
Query: 424 ttctgcggtagacagtgcaagaaagcatacattacaaaccaaacagaacggaagaagcag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ttctgcggtagacagtgcaagaaagcatacattacaaaccaaacagaacggaagaagcag 413
Query: 484 agataaaaagcaaggggaatctcctcacgactgaaaatcggaggcaacagaattcatcag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agataaaaagcaaggggaatctcctcacgactgaaaatcggaggcaacagaattcatcag 353
Query: 544 tttgataagtcacaggaactgtggtttcccatacagaccctccagagcttctttctcagg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tttgataagtcacaggaactgtggtttcccatacagaccctccagagcttctttctcagg 293
Query: 604 ctccatcctaacagcacgtaggcgctggtcttgagcatgtcgctgattagtatgttattt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ctccatcctaacagcacgtaggcgctggtcttgagcatgtcgctgattagtatgttattt 233
Query: 664 attattaaaggtgttgactcttctgtta 691
||||||||||||||||||||||||||||
Sbjct: 232 attattaaaggtgttgactcttctgtta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_o16.g1 MSMg01no303_o16.g1 CHROMAT_FILE:
MSMg01no303_o16.g1 PHD_FILE: MSMg01no303_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:57 2005
(304 letters)
>mm_chr13_76429855_76430558
Length = 704
Score = 586 bits (303), Expect = e-172
Identities = 303/303 (100%)
Strand = Plus / Plus
Query: 1 aagcagtgttgggattggagcctattttgatttttccctctggcaactcttgataactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagcagtgttgggattggagcctattttgatttttccctctggcaactcttgataactct 260
Query: 61 gaaaattattcttgcttaactgaagaattgtgacttgtatttttggagccttacccttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaattattcttgcttaactgaagaattgtgacttgtatttttggagccttacccttgc 320
Query: 121 agcatatctgttttcttgtgtaagagtcagagattttataaagatcaagaaaaattgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcatatctgttttcttgtgtaagagtcagagattttataaagatcaagaaaaattgatg 380
Query: 181 gagagaagttgacaagttcacattctgctttctttcattggtaagtactttttgatagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagagaagttgacaagttcacattctgctttctttcattggtaagtactttttgatagag 440
Query: 241 cacacatctttcttcataagtgagaaagaatgggctcaggtagttatgagtcagctgcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacacatctttcttcataagtgagaaagaatgggctcaggtagttatgagtcagctgcac 500
Query: 301 agt 303
|||
Sbjct: 501 agt 503
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|