Query= MSMg01no305_p10.b1 MSMg01no305_p10.b1 CHROMAT_FILE:
MSMg01no305_p10.b1 PHD_FILE: MSMg01no305_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:33 2005
(371 letters)
>mm_chr13_118879085_118879855
Length = 771
Score = 704 bits (364), Expect = 0.0
Identities = 369/371 (99%)
Strand = Plus / Minus
Query: 1 aattttgttgaaggntgtgttcttctaagccttcatgaaacacagacctctgtaaaatta 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aattttgttgaaggctgtgttcttctaagccttcatgaaacacagacctctgtaaaatta 512
Query: 61 tctgtactacaattacataatgtttgtgttcacataagccaacctccttcagcctcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tctgtactacaattacataatgtttgtgttcacataagccaacctccttcagcctcttct 452
Query: 121 ttcctttattatctagcagaacaacccaagccatctacaaaggtaactcagaaccggata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ttcctttattatctagcagaacaacccaagccatctacaaaggtaactcagaaccggata 392
Query: 181 tttctgtatagcctacatttcccaagaaactaaaggccaactaaacacgagctttttcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tttctgtatagcctacatttcccaagaaactaaaggccaactaaacacgagctttttcca 332
Query: 241 tgttaactgccatttttgcttgaaattttatattcttatcttcaagtcaatgaatttctg 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 331 tgttaactgccatttttgcttgaaattttaaattcttatcttcaagtcaatgaatttctg 272
Query: 301 attatcacacatcacactttactctttcaaatcaagcatctttcagatattttctcaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 attatcacacatcacactttactctttcaaatcaagcatctttcagatattttctcaggt 212
Query: 361 gttttctcctg 371
|||||||||||
Sbjct: 211 gttttctcctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_p10.g1 MSMg01no305_p10.g1 CHROMAT_FILE:
MSMg01no305_p10.g1 PHD_FILE: MSMg01no305_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:33 2005
(339 letters)
>mm_chr13_118722602_118723342
Length = 741
Score = 576 bits (298), Expect = e-169
Identities = 330/342 (96%), Gaps = 4/342 (1%)
Strand = Plus / Plus
Query: 1 agtctgtaccctaaagtttccagaccagtttctgtctcatgttctcatcagatagaaaaa 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 201 agtctgtaccctaaagtttccagaccagtttctgcctcatgttctcatcagatag-aaaa 259
Query: 61 cgaatgctaacctggctcctaattccacagttctgttgctttgtgaagtcatttataaat 120
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 260 cgaatgttaacctggctcctaattccacagttctgttgctttgtgaagtcatttttaaat 319
Query: 121 gaatcagtgcatataaagatgaacattatggcactttaatttgaagcaatagtatctata 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 320 gaatcagtgcatataaagatgaacgttatggcactttaatttgaagcaatagtatctata 379
Query: 181 tcaaaattagtagaaagtgagaagaa---agccttcaaagtactcataaatgtagatgtt 237
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 380 tcaaaattagtagaaagtgagaagaagaaagcctttaaagtactcataaatgtagatgtt 439
Query: 238 tcagttttcatggagttgttcaggaggaaatatatttggagtcttttattttagtgatta 297
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 440 tcagttttcatggagttgttcaggaggaaatatatttggagtcttttaacttagtgatta 499
Query: 298 aagctaaattttagtcccattccagaaaaatgtccataacca 339
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 500 aagctaaattttagtcccatttcagaaaaatgtccataacca 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 741
Length adjustment: 9
Effective length of query: 330
Effective length of database: 732
Effective search space: 241560
Effective search space used: 241560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
