Query= MSMg01no306_i11.b1 MSMg01no306_i11.b1 CHROMAT_FILE:
MSMg01no306_i11.b1 PHD_FILE: MSMg01no306_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:20 2005
(618 letters)
>mm_chr13_89147243_89148260
Length = 1018
Score = 1110 bits (574), Expect = 0.0
Identities = 604/614 (98%)
Strand = Plus / Plus
Query: 4 ggaattctttccactttacttaccagcgaacaggataaccaataagtacatgtatctcta 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttccactttatttaccagcgaacaggataaccaataagtacatgtatctcta 263
Query: 64 ttgctgagtgttacagcattgccaatttctctaccccatgattgatagaagccttgctgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgctgagtgttacagcattgccaatttctctaccccatgattgatagaagccttgctgt 323
Query: 124 tcaccatctgttattaaagagtcatgttccttgagcatagtttctttatatcattttcaa 183
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 324 tcaccatctgttattaaagagtcatgttcctcgagcatagtttctttatatcattttcaa 383
Query: 184 tattgtgggcattatacatttcctattacctctatgaaagacatacaggctttgaatata 243
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tattgttggcattatacatttcctattacctctatgaaagacatacaggctttgaatata 443
Query: 244 acatctggcttcattgttttcttgctcttcatcatgttgctgacatcttcactgtttatt 303
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acatctggtttcattgttttcttgctcttcatcatgttgctgacatcttcactgtttatt 503
Query: 304 gaaatgtttcaagcttacatatgaagcttttggagactgattcaactgcttaaaaaaacc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaaatgtttcaagcttacatatgaagcttttggagactgattcaactgcttaaaaaaacc 563
Query: 364 taaactatgacatgaacaggttcaaatgcatatgcataccccataaaagtctcaacttta 423
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taaaatgtgacatgaacaggttcaaatgcatatgcataccccataaaagtctcaacttta 623
Query: 424 atgagtaagcctgtttacaggacctctggatttaaaaattataaaaggaacgttggccct 483
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 624 atgagtaagcctgcttacaggacctctggatttaaaaattataaaaggaacattggccct 683
Query: 484 ttattgagtacagccattttttgatagtttatgttgagccaattaacttacacttataaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttattgagtacagccattttttgatagtttatgttgagccaattaacttacacttataaa 743
Query: 544 tgggcgtagcagaaaagagaatcttaagatctattttgagatgactcatacattacttaa 603
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 744 tgggcgtagcagaaaagagaatcttaagttctattttgagataactcatacattacttaa 803
Query: 604 aagaagagcagaag 617
||||||||||||||
Sbjct: 804 aagaagagcagaag 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_i11.g1 MSMg01no306_i11.g1 CHROMAT_FILE:
MSMg01no306_i11.g1 PHD_FILE: MSMg01no306_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:20 2005
(645 letters)
>mm_chr13_89313437_89314482
Length = 1046
Score = 1180 bits (610), Expect = 0.0
Identities = 637/646 (98%), Gaps = 1/646 (0%)
Strand = Plus / Minus
Query: 1 aatacaatggaaagagaatttcatttacatctggaactcaaatttaaaaccaggaatcta 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 846 aatacaatggaaagagaatttcatttacatctggaactcaaatttaaaactaggaatcta 787
Query: 61 agttgtaaaaaaa-ataaataaagttggccttggaaggagacgaaggcatgattttagaa 119
||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 786 agttgtaaaaaaataaaaataaagttgaccttggaaggagacgaaggcatgattttagaa 727
Query: 120 gcattgccactttaaacacctgctgcaagcagacatagttcatcccactaaacttttcta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gcattgccactttaaacacctgctgcaagcagacatagttcatcccactaaacttttcta 667
Query: 180 tgtctgatacctgccgagcaacctattcaatctgatcttaaattatcttaccttgtggac 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 666 tgtctgatacctgccgagcaacctattcaatctgatcttagattatcttaccttgtggac 607
Query: 240 catagtggacagtatattaactgtcttttgaaagtcacattgggtattttaaaattatcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 catagtggacagtatattaactgtcttttgaaagtcacattgggtattttaaaattatcc 547
Query: 300 tgcgagcccttatattcaaaaaatatatgttcatttatataaatggttataaaactgata 359
|| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgtgagtccttatattcaaaaaatatatgttcatttatataaatggttataaaactgata 487
Query: 360 tttttacacagaacagtggatttgttgtgtgacgataaaagatcaaagtatttttttgag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tttttacacagaacagtggatttgttgtgtgacgataaaagatcaaagtatttttttgag 427
Query: 420 gtatttgtagcactttgtgttccttaatgaatgcgaacaagaacattcatgaaggtttgc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gtatttgtagcactttgtgttccttaatgaatgcgaacaagaacattcatgaaggtttgc 367
Query: 480 atgcacagatcccatgctgaggccaggaagcaacagagagaactggggtatccgcaccta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 atgcacagatcccatgctgaggccaggaagcaacagagagaactggggtatccgcaccta 307
Query: 540 ccgtgttacttcctacctatgtaatgttcaacttgcctaagcattgaagtttaattgtat 599
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 306 ccatgttacttcctacctatgtaatgttcaacttgtctaagcattgaagtttaattgtat 247
Query: 600 gaactatttaagggatttttaatagaattttaacacataaacatta 645
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gaactatttaagggatttttaatagaattttaacacataaacatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1046
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1036
Effective search space: 657860
Effective search space used: 657860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
