Query= MSMg01no307_l05.b1 MSMg01no307_l05.b1 CHROMAT_FILE:
MSMg01no307_l05.b1 PHD_FILE: MSMg01no307_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:49 2005
(186 letters)
>mm_chr13_49699030_49699614
Length = 585
Score = 337 bits (174), Expect = 3e-97
Identities = 183/186 (98%), Gaps = 1/186 (0%)
Strand = Plus / Plus
Query: 1 aaataaagtaaaaaagcagctggaaacaagattacagcatagcagctcccaagtcccaag 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 aaataaagtaaaaaagcagctggaaacaagattacagcatagcagctca-aagtcccaag 259
Query: 61 tctctttcttgcatgctccaatattctacaaggatcttactctagttgaagtaactatac 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 260 tctctttcttgcatgctccaatattctacaaggatcttactctagttaaagtaactatac 319
Query: 121 ttggtataactaagcagtgttagaagtagcatggcaccaggcacactcctttcatcacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttggtataactaagcagtgttagaagtagcatggcaccaggcacactcctttcatcacta 379
Query: 181 agtgtt 186
||||||
Sbjct: 380 agtgtt 385
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 186
Length of database: 585
Length adjustment: 8
Effective length of query: 178
Effective length of database: 577
Effective search space: 102706
Effective search space used: 102706
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no307_l05.g1 MSMg01no307_l05.g1 CHROMAT_FILE:
MSMg01no307_l05.g1 PHD_FILE: MSMg01no307_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:49 2005
(285 letters)
>mm_chr13_49864388_49865072
Length = 685
Score = 516 bits (267), Expect = e-151
Identities = 279/283 (98%)
Strand = Plus / Minus
Query: 1 aagacaaatggagaagagtgcagaaggcctcacattctccagggccacagtctatggcct 60
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 483 aagacaaatggagaagagggcagaaggcctcacattctccagggccagagtctatggcct 424
Query: 61 cttcagcgaacagcaagtttgttatacacggcactagggttaaaggggactacaatgcct 120
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 423 cttcagcgaacagcaagtttgttatacacggcattggggttaaaggggactacaatgcct 364
Query: 121 gtataggtttcctttgtgttttctttaatacggaactgctgctgctccggcttgaacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gtataggtttcctttgtgttttctttaatacggaactgctgctgctccggcttgaacaca 304
Query: 181 ccagcaaggccagctcggagccctctgtctgtgggagtgaactcgcctgcctggaactgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccagcaaggccagctcggagccctctgtctgtgggagtgaactcgcctgcctggaactgc 244
Query: 241 tgctgttccggcagcggctctatgaacagatcagcaggaacag 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tgctgttccggcagcggctctatgaacagatcagcaggaacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
