Query= MSMg01no308_l03.b1 MSMg01no308_l03.b1 CHROMAT_FILE:
MSMg01no308_l03.b1 PHD_FILE: MSMg01no308_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:05 2005
(171 letters)
>mm_chr13_58689906_58690472
Length = 567
Score = 281 bits (145), Expect = 2e-80
Identities = 163/171 (95%), Gaps = 4/171 (2%)
Strand = Plus / Plus
Query: 1 aagcaaaaccttgctttttctttccctcttttttgtgcttctgcccatgatttccctaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagcaaaaccttgctttttctttccctcttttttgtgcttctgcccatgatttccctaac 260
Query: 61 acttcccgctttctcagaagttcccttctggctgagtggctgcttgcccacccacatgct 120
|||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 261 acttcccgctttctcagaagttcccttctggcagagtggctgcttgcccac----atgct 316
Query: 121 gctcctgtgaagttgtcatggctgcgtctctctcctccagtagacggagat 171
||||||| |||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 317 gctcctgcgaagttgtcatggctgcgtctctctcttccagtagaccgagat 367
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 567
Length adjustment: 8
Effective length of query: 163
Effective length of database: 559
Effective search space: 91117
Effective search space used: 91117
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no308_l03.g1 MSMg01no308_l03.g1 CHROMAT_FILE:
MSMg01no308_l03.g1 PHD_FILE: MSMg01no308_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:05 2005
(285 letters)
>mm_chr13_58868086_58868768
Length = 683
Score = 418 bits (216), Expect = e-121
Identities = 268/288 (93%), Gaps = 8/288 (2%)
Strand = Plus / Minus
Query: 1 tagtaaaggctctgtacaaagagagccccagcatccgctgcttcctgatacagaggagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tagtaaaggctctgtacaaagagagccccagcatccgctgcttcctgatacagaggagca 424
Query: 61 aggctgttgtaaggggggggggggggcggtcaagcaaagcaggaacaggaggcgggggc- 119
|||||||||||||||||||||| ||||| |||| ||| || |||||||||||||||
Sbjct: 423 aggctgttgtaaggggggggggcgggcg----agcagagcggggacaggaggcgggggca 368
Query: 120 ggaaatggagac--gggtggtagtggaatccctgtaagcttttaattaaaacaaacaaac 177
|| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gg-aatggggacaggggtggtagtggaatccctgtaagcttttaattaaaacaaacaaac 309
Query: 178 aaaatcatcagccttgaggctagccaactaccactgtggtaaaataaaaaggacctaggt 237
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 308 aaaatcatcagctttgaggctagccaactaccactgtggtaaaataaaaaagacctaggt 249
Query: 238 atctctgaccatcttaacatactttgaataaaggaaaagtaaagggac 285
|||||||| |||| |||| ||||||||||||||||||||||| ||||
Sbjct: 248 atctctgatcatcagaacaaactttgaataaaggaaaagtaaatggac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 683
Length adjustment: 9
Effective length of query: 276
Effective length of database: 674
Effective search space: 186024
Effective search space used: 186024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
