Query= MSMg01no308_m14.b1 MSMg01no308_m14.b1 CHROMAT_FILE:
MSMg01no308_m14.b1 PHD_FILE: MSMg01no308_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:12 2005
(239 letters)
>mm_chr13_64779011_64779650
Length = 640
Score = 427 bits (221), Expect = e-124
Identities = 235/243 (96%), Gaps = 7/243 (2%)
Strand = Plus / Plus
Query: 1 ttaaagaatcgataagctctcaacaaaagggaatgggcagaaaattaaataacaagagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaaagaatcgataagctctcaacaaaagggaatgggcagaaaattaaataacaagagga 260
Query: 61 agacatcaagaagatgaagcatagccaaggtggaaatggtcaattttgtcaaaaactctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacatcaagaagatgaagcatagccaaggtggaaatggtcaattttgtcaaaaactctg 320
Query: 121 ggactcctgatgctttcatctgtcctctgaggctaggtctcagtcttgcccagaccataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggactcctgatgctttcatctgtcctctgaggctaggtctcagtcttgcccagaccataa 380
Query: 181 taagattcaaaggatt----ttttatggtatgaataggaatgagcatggtgcaaaactac 236
|||||||||||||| | | ||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagattcaaaggaataaaat---atggtatgaataggaatgagcatggtgcaaaactac 437
Query: 237 tga 239
|||
Sbjct: 438 tga 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 640
Length adjustment: 9
Effective length of query: 230
Effective length of database: 631
Effective search space: 145130
Effective search space used: 145130
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no308_m14.g1 MSMg01no308_m14.g1 CHROMAT_FILE:
MSMg01no308_m14.g1 PHD_FILE: MSMg01no308_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:12 2005
(217 letters)
>mm_chr13_64939848_64940464
Length = 617
Score = 420 bits (217), Expect = e-122
Identities = 217/217 (100%)
Strand = Plus / Minus
Query: 1 taaattttcacaactatttaaagtatcaaaaatatactcaacagtttcatgtaaatgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 taaattttcacaactatttaaagtatcaaaaatatactcaacagtttcatgtaaatgtaa 312
Query: 61 ccatctaaccattctcaaatatcagagagaaacatttagaaataggttcagagcaatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ccatctaaccattctcaaatatcagagagaaacatttagaaataggttcagagcaatcac 252
Query: 121 aggacataacacaggcaccttccatcatctcaggacttcatataggtgacatgatggcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aggacataacacaggcaccttccatcatctcaggacttcatataggtgacatgatggcta 192
Query: 181 ttcttggctgtcaacttgagtacatctggaattaaat 217
|||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttcttggctgtcaacttgagtacatctggaattaaat 155
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 617
Length adjustment: 9
Effective length of query: 208
Effective length of database: 608
Effective search space: 126464
Effective search space used: 126464
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
