Query= MSMg01no311_g17.b1 MSMg01no311_g17.b1 CHROMAT_FILE:
MSMg01no311_g17.b1 PHD_FILE: MSMg01no311_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:16 2005
(377 letters)
>mm_chr13_78312149_78312924
Length = 776
Score = 646 bits (334), Expect = 0.0
Identities = 361/374 (96%), Gaps = 9/374 (2%)
Strand = Plus / Minus
Query: 5 gaattcactctgtcaccgcaagtttctccaattcttgtttccaactttgtgcctttcctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gaattcactctgtcaccgcaagtttctccaattcttgtttccaactttgtgcctttcctt 514
Query: 65 gtacagagtctcctttgctccagaaccccagaaggctagaataaaacattttcaaagtag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gtacagagtctcctttgctccagaaccccagaaggctagaataaaacattttcaaagtag 454
Query: 125 aaactcaattcatagaaaaaccacactgaccaatgacttacaaacatctagtgatattta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aaactcaattcatagaaaaaccacactgaccaatgacttacaaacatctagtgatattta 394
Query: 185 tctgagctgtgcattcagatgcggagagtgctatagttcagaataaatgagtccccaggt 244
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tctgagctgtgcattcagatgtggagagtgctatagttcagaataaatgagtccccaggt 334
Query: 245 cactaagattcaacaggtccccttgtagccctgcacactccagctgccaaaatgcattaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cactaagattcaacaggtccccttgtagccctgcacactccagctgccaaaatgcattaa 274
Query: 305 gctctgtgagtttccattattttttcataca----ccccccagctgctagtttaaacact 360
||||||||||||||||| | |||| |||| | || |||||||||||||||||||
Sbjct: 273 gctctgtgagtttccatcagtttt-catagagggtcc----agctgctagtttaaacact 219
Query: 361 tccaccatgaatga 374
||||||||||||||
Sbjct: 218 tccaccatgaatga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 776
Length adjustment: 9
Effective length of query: 368
Effective length of database: 767
Effective search space: 282256
Effective search space used: 282256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_g17.g1 MSMg01no311_g17.g1 CHROMAT_FILE:
MSMg01no311_g17.g1 PHD_FILE: MSMg01no311_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:16 2005
(291 letters)
>mm_chr13_78147431_78148121
Length = 691
Score = 503 bits (260), Expect = e-147
Identities = 276/290 (95%), Gaps = 14/290 (4%)
Strand = Plus / Plus
Query: 1 catgtcccttgttatggacttaagtacacacatacttgctcccatgggcagaggtgctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtcccttgttatggacttaagtacacacatacttgctcccatgggcagaggtgctaa 260
Query: 61 aggaaaaacagagcaagtaagaacagaagctcctagctactgcctcccactacaagatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaaaaacagagcaagtaagaacagaagctcctagctactgcctcccactacaagatat 320
Query: 121 gtccagatgttgtatgctaggaatggctgctgctctgtagtgtatgggtccatgacttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtccagatgttgtatgctaggaatggctgctgctctgtagtgtatgggtccatgacttac 380
Query: 181 cccacccccaaacacacacacacacacacacacacacacacacacacacacacactccct 240
||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 cccacccccaaacacacacacacacacacacacacacacac--------------tccct 426
Query: 241 tgtatgccttcttaatgagaaccatagaaacaaattgtaagctatcattc 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tgtatgccttcttaatgagaaccatagaaacaaattgtaagctatcattc 476
Score = 76.1 bits (39), Expect = 2e-18
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 197 cacacacacacacacacacacacacacacacacacacac 235
|||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cacacacacacacacacacacacacacacacacacacac 653
Score = 76.1 bits (39), Expect = 2e-18
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 195 cacacacacacacacacacacacacacacacacacacac 233
|||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cacacacacacacacacacacacacacacacacacacac 653
Score = 76.1 bits (39), Expect = 2e-18
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 193 cacacacacacacacacacacacacacacacacacacac 231
|||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cacacacacacacacacacacacacacacacacacacac 653
Score = 74.2 bits (38), Expect = 9e-18
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 192 acacacacacacacacacacacacacacacacacacac 229
||||||||||||||||||||||||||||||||||||||
Sbjct: 690 acacacacacacacacacacacacacacacacacacac 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 7
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
