Query= MSMg01no311_g22.b1 MSMg01no311_g22.b1 CHROMAT_FILE:
MSMg01no311_g22.b1 PHD_FILE: MSMg01no311_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:17 2005
(557 letters)
>mm_chr13_83043095_83044051
Length = 957
Score = 1017 bits (526), Expect = 0.0
Identities = 547/554 (98%)
Strand = Plus / Minus
Query: 4 ggaattctctgggtcttgcctattctcttatttttctgtcccaactggaaaagaagaagg 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 ggaattctctgggtcttggctattctcttatttttctgtcccaactggaaaagaagaagg 698
Query: 64 atctactaacaaccacagctgtgttgaaaacaagtgaaagccaatttaccttgctaattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 atctactaacaaccacagctgtgttgaaaacaagtgaaagccaatttaccttgctaattt 638
Query: 124 ttaacatgctgctttctttaactgcagagctgtcttttttcttttactatccagaattag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ttaacatgctgctttctttaactgcagagctgtcttttttcttttactatccagaattag 578
Query: 184 ttaatttttttcacaatctatttttcccctagaaagtaaccccttgtgtcctaccatggg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttaatttttttcacaatctatttttcccctagaaagtaaccccttgtgtcctaccatggg 518
Query: 244 ctcctcactgaatgatttctttctcttctaattttatttcttcaccttgggagggcctca 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 517 ctcctcactgaatgatttctttctcttctaattatatttcttcaccttgggagggcctca 458
Query: 304 cactgcttcaggataagcaacccagcagagcctaaggtcaggtgtgccctagaatctaag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cactgcttcaggataagcaacccagcagagcctaaggtcaggtgtgccctagaatctaag 398
Query: 364 tctagaaattacaaccaccgaacaagagcaggagagggaaagaagaggcagagtggggaa 423
|||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 397 tctagaaattacaatcactgaacaagagcaggagagggaaagaagacgcagagtggggaa 338
Query: 424 tttataatgatattgaggctcagtctaaggaataattaaacaaagggcatcctacattac 483
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tttgtaatgatattgaggctcagtctaaggaataattaaacaaagggcatcctacattac 278
Query: 484 agcatttgatagaagcctctgaggacagaatgaagactttcagagtctgcgctgatgtga 543
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 277 agcatttgatagaagcctctgaggacagaatgaagactttcagagtctgcactgatgtga 218
Query: 544 atccttcctgaaag 557
||||||||||||||
Sbjct: 217 atccttcctgaaag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_g22.g1 MSMg01no311_g22.g1 CHROMAT_FILE:
MSMg01no311_g22.g1 PHD_FILE: MSMg01no311_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:17 2005
(294 letters)
>mm_chr13_82972616_82973309
Length = 694
Score = 551 bits (285), Expect = e-161
Identities = 291/293 (99%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 1 acttggcaaatgacagcctttgcactccttttaggtctttgaccttactgcccttgctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttggcaaatgacagcctttgcactccttttaggtctttgaccttactgcccttgctaa 260
Query: 61 tattttagaatgtctagaaagaatacaccggagctattcatgaactagcaatttggctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattttagaatgtctagaaagaatacaccggagctattcatgaactagcaatttggctag 320
Query: 121 aaaatgtagcctgaaaatgaaaatggaaactcagtgcaaagacagactatgactacaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaatgtagcctgaaaatgaaaatggaaactcagtgcaaagacagactatgactacaaag 380
Query: 181 ctgagcagccaactttctatagagaacataaaag-aataaaaggttataagtcacacccc 239
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 381 ctgagcagccaactttctatagagaacataaaaggaa-aaaaggttataagtcacacccc 439
Query: 240 attcatgtattaaacaaccacaattctttctatccataaggcataaaacattc 292
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attcatgtattaaacaaccacaattctttctatccataaggcataaaacattc 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
