Query= MSMg01no311_p21.b1 MSMg01no311_p21.b1 CHROMAT_FILE:
MSMg01no311_p21.b1 PHD_FILE: MSMg01no311_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:58 2005
(323 letters)
>mm_chr13_58288765_58289487
Length = 723
Score = 582 bits (301), Expect = e-171
Identities = 319/335 (95%), Gaps = 16/335 (4%)
Strand = Plus / Plus
Query: 5 gaattcattctatggaaaccaaggacaggaagtcaggggggcaggggtaacgttcccagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gaattcattctatggaaaccaaggacaggaagtcaggggggcaggggtaacgttcccagt 248
Query: 65 aataacacaaaccccaggggcttcacatacacagaccttgaagcccactgagacttacta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aataacacaaaccccaggggcttcacatacacagaccttgaagcccactgagacttacta 308
Query: 125 gagagagagagaga----------------atggtatactacatgctaccaggctctgta 168
|||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 309 gagagagagagagagagagagagagagagaatggtatactacatgctaccaggctctgta 368
Query: 169 tgaaccagtgagacatgtgttaaaaagaaatgctagattttatgctaaagaatgataaaa 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgaaccagtgagacatgtgttaaaaagaaatgctagattttatgctaaagaatgataaaa 428
Query: 229 gggggaagcatcagaaactcccagaggtgaaagtgtccttgtcagccagaggaaggcagc 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gggggaagcatcagaaactcccagaggtgaaagtgtccttgtcagccagaggaaggcagc 488
Query: 289 agaggtcacagccaggggctggagaagccctggag 323
|||||||||||||||||||||||||||||||||||
Sbjct: 489 agaggtcacagccaggggctggagaagccctggag 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_p21.g1 MSMg01no311_p21.g1 CHROMAT_FILE:
MSMg01no311_p21.g1 PHD_FILE: MSMg01no311_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:58 2005
(253 letters)
>mm_chr13_58456112_58456764
Length = 653
Score = 451 bits (233), Expect = e-131
Identities = 245/249 (98%)
Strand = Plus / Minus
Query: 1 tgtgtttttattctttaactttataattaaccaattcatggtccccagtccccgcaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tgtgtttttattctttaactttataattaaccaattcatggtccccagtccccgcaacta 390
Query: 61 ttttgaagcaaacctaaatgctgaatcttttcctcattaaatcccttaagcattttactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttttgaagcaaacctaaatgctgaatcttttcctcattaaatcccttaagcattttactg 330
Query: 121 tcaggtcaactttgtcatacaatttgtactggtaaagaatctgttcaaaatggctctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcaggtcaactttgtcatacaatttgtactggtaaagaatctgttcaaaatggctctgct 270
Query: 181 ttgattcatgaatggtttttattgcgttactgcagctagcaattaaactgtatcttttat 240
|||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 269 ttgaaacatgaaaggtttttattgcgttactgcagctagtaattaaactgtatcttttat 210
Query: 241 tttgatatg 249
|||||||||
Sbjct: 209 tttgatatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
