Query= MSMg01no315_g11.b1 MSMg01no315_g11.b1 CHROMAT_FILE:
MSMg01no315_g11.b1 PHD_FILE: MSMg01no315_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:51 2005
(402 letters)
>mm_chr13_103115682_103116483
Length = 802
Score = 746 bits (386), Expect = 0.0
Identities = 398/402 (99%)
Strand = Plus / Minus
Query: 1 gaacagctataacacaaacataacatttgggactgtgggggtggctttagtggaagagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gaacagctataacacaaacataacatttgggactgtgggggtggctttagtggaagagcg 543
Query: 61 ctcgcctcgtctgtgagaactcttgggttcaccttctaggactataagtgattaagaaaa 120
|| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 542 cttgcctcgtctgtgagaactcttgggtttactttctaggactataagtgattaagaaaa 483
Query: 121 caaataaataataaataggaagtacatttgttctcagatatgttaggagtggcttcaagg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 482 caaataaataataaataggaagtacatttgttctcagatatgttaggagtggtttcaagg 423
Query: 181 tccatcttttggtctattcttgataatccatcatcactagtcctagggagaagccatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tccatcttttggtctattcttgataatccatcatcactagtcctagggagaagccatgat 363
Query: 241 tcatttttgtttggtcctatcttgtctgatatttctggggatgactagttagaattcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcatttttgtttggtcctatcttgtctgatatttctggggatgactagttagaattcagg 303
Query: 301 actccttccttctgttagagaagctatgttttcttgcgagcttgtccaaattgtgtgtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 actccttccttctgttagagaagctatgttttcttgcgagcttgtccaaattgtgtgtct 243
Query: 361 atcttctgagccactagattctctaatgacttaaaatttttg 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atcttctgagccactagattctctaatgacttaaaatttttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_g11.g1 MSMg01no315_g11.g1 CHROMAT_FILE:
MSMg01no315_g11.g1 PHD_FILE: MSMg01no315_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:51 2005
(644 letters)
>mm_chr13_103055000_103056044
Length = 1045
Score = 1189 bits (615), Expect = 0.0
Identities = 641/657 (97%), Gaps = 13/657 (1%)
Strand = Plus / Plus
Query: 1 atagatttctagataatcttcagaaaccacaccttactgaagagctattgccagtaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 atagatttctagataatcttcagaaaccacaccttactgaagagctattgccagtaaata 248
Query: 61 gttgctggtagggggaagaggaagagaatcacgttt------------ttgttgttgttg 108
|||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 249 gttgctggtagggggaagaggaagagaatcacgtttttgttgttgttgttgttgttgttg 308
Query: 109 ttttgttttgttttgttttgtttttttctttgaggatatggccattggtaaacgtctgga 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttttgttttgttttgttttgtttttttctttgaggatatggccattggtaaacgtctgga 368
Query: 169 tgctaccatcatgaacatagggacagcactaacttgatttaggaagttataaaagataag 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgctaccatcatgaacatagggacagcactaacttgatttaggaagttataaaagataag 428
Query: 229 aaataaagctggaacatactttttatgggagatggagagagttggagaaaaggaatcgag 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aaataaagctggaacatactttttatgggagatggagagagttggagaaaaggaatcgag 488
Query: 289 gtataaattatattttattgtatatatgtaagacacccttaaaaat-aacacacaaatag 347
|||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||
Sbjct: 489 gtataaattatattttattgtatatatgtaagacacccttaaaaataaagatacaaatag 548
Query: 348 aaataaaccaaatattctttgtttaaaaacatcatgaggtctttatatacaattatttta 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aaataaaccaaatattctttgtttaaaaacatcatgaggtctttatatacaattatttta 608
Query: 408 aaatggcaccaatacaacctaccccctttttatgcaaataaacatcttatctgacaaatt 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aaatggcaccaatacaacctaccccctttttatgcaaataaacatcttatctgacaaatt 668
Query: 468 attggaaaggaagaaagtagggtagaaattgtccttactacttccttgaaattcctccct 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 attggaaaggaagaaagtagggtagaaattgtccttactacttccttgaaattcctccct 728
Query: 528 attgtccttacatcaactgtgtcagtgtgtttgtcataacaacccaacaatgtaattcta 587
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 actgtccttacatcaactgtgtcagtgtgtttgtcataacaacccaacaatgtaattcta 788
Query: 588 catcaataactcctcagccctgtgtactattgttctggtgggattatgtagtgttga 644
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 catcaataactcctcagccctgtgtactattgttctggtgggattatgtagtgttga 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1045
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1035
Effective search space: 656190
Effective search space used: 656190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
