This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
MSMg01-316I01
Chromosome
13 (Build37)
Map Location
86,868,166 - 86,868,745
singlet/doublet
singlet
Overlap gene
none
Upstream gene
LOC675662
,
Cox7c
,
LOC100042887
,
LOC100042893
Downstream gene
none
Link
Open Mouse BAC browser
Click to get alignment info.
name
LOC675662
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:675662
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
pseudo
: _no_value
name
Cox7c
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:12867
MGI:103226
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100042887
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100042887
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs
name
LOC100042893
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100042893
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
pseudo
: _no_value
name
Cox7c
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:93102385
GeneID:12867
MGI:103226
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: cytochrome c oxidase, subunit VIIc
transcript_id
: NM_007749.3
name
LOC100042887
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149264383
GeneID:100042887
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs
product
: similar to pol protein
transcript_id
: XM_001478997.1
name
Cox7c
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:6680991
CCDS:CCDS26668.1
GeneID:12867
MGI:103226
definition
GO_component
: GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]
GO_function
: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO_process
: GO:0006118 - electron transport [Evidence IEA]
codon_start
: 1
product
: cytochrome c oxidase, subunit VIIc
protein_id
: NP_031775.1
name
LOC100042887
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149264384
GeneID:100042887
definition
codon_start
: 1
product
: similar to pol protein
protein_id
: XP_001479047.1
name
LOC675662
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:675662
definition
number
: 1
pseudo
: _no_value
name
LOC100042893
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042893
definition
number
: 1
pseudo
: _no_value
name
LOC100042893
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042893
definition
number
: 2
pseudo
: _no_value
name
LOC100042893
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042893
definition
number
: 3
pseudo
: _no_value
name
LOC100042893
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042893
definition
number
: 4
pseudo
: _no_value
clone name
MSMg01-359B23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-437P15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-539B10
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-341P06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-063K03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-079H03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-261P11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-186I04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-076M19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-465B21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-143M03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-324L04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-261P12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-405E23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-237G16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-510L10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-355O09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-085B21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-447A13
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-545G12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-082G20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-360I17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-294D07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-151F10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-216P22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-387E20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-054F03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-318C04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-300D09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-053N01
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-433L05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-271N19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-456E09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-316I01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-380K15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-055M14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-392F10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-405F02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-539O10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-329B20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-540G02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-142F23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-076E17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-079I17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-122J01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-086N19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-093E24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-475K14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-393J21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-458H01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-371F13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-174P13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-448P20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-330N18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-487H22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-188J01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-327C17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-527E07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-346B07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-395D10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-329P18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-268N08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-356P15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-336M20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-155A01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-532E14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-373M21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-164J20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-163J20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-116F17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-519C05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-547E06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-316G18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-389E05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-372J15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-269P08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-251P13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-038E11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-294F18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-331J07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-102A19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-061K01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-200E05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-231M03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-079L22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-085L10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-062D18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-327D16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-111O08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-345L03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-232H15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-264F13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-318E19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-014D05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-043D22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-203P23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-030F18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-225K19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-261E10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-275A15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-304G14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-033O24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-287N10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-349M04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-189G08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-314F21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-253H17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-158J20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-270G09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-127P14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-322H09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-322J03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-018E13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-013H24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-246B04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-300L02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-309N21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-239B23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-071J15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-191J24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-173E14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-274H14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-019E10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-320A11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-196L11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-118L22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-201H19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-207I20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-233I10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-206J02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-136J01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-035N02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-001E08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-244D15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-236F10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-142L07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-091O03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-165E07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-157N05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-149A10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-158G03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-003K19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-314C16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-054P10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-299B05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-207F04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-076E01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-019F12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-068N17
singlet/doublet
doublet
plural/unique
unique