Query= MSMg01no317_d09.b1 MSMg01no317_d09.b1 CHROMAT_FILE:
MSMg01no317_d09.b1 PHD_FILE: MSMg01no317_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:11 2005
(652 letters)
>mm_chr13_103645077_103646128
Length = 1052
Score = 1228 bits (635), Expect = 0.0
Identities = 647/651 (99%)
Strand = Plus / Minus
Query: 1 gattccatattaaatataaagatttcaatgcctatttttgtactaactaactgaatttta 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 851 gattccatattaaatataaagatttcaatgcctatttttgtactaactaattgaacttta 792
Query: 61 gttgatttgcccaagaaagttttctgaaatttccaggatatgaatttatcatttctaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gttgatttgcccaagaaagttttctgaaatttccaggatatgaatttatcatttctaatt 732
Query: 121 tctttaatgaacactgacagattagtatatttaatggtcccttcctgaagcgagagaagg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 731 tctttaatgaacactgacagattagtatatttaatggtcccttcctgaagcgagaggagg 672
Query: 181 ctttaatttgaattaacactaaatgtgttctgtagtatcttttaaaaacaatcagattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ctttaatttgaattaacactaaatgtgttctgtagtatcttttaaaaacaatcagattat 612
Query: 241 cagacttaatgattatgaatttaatagcttgagaatagagttcttgatagatgaactgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 cagacttaatgattatgaatttaatagcttgagaatagagttcttgatagatgaactgat 552
Query: 301 aatatatctcagactaccttcctaattaactatcaggggcctatcattttcaacagcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aatatatctcagactaccttcctaattaactatcaggggcctatcattttcaacagcttc 492
Query: 361 tttaaggctaagtaaacacgatgttaattaaactcacaaataatgtgaggggatgttgat 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 491 tttaaggctaagtaaacacgatgttaattaaactcacagataatgtgaggggatgttgat 432
Query: 421 tgctgcaacaagaaaaagaaacccatgcagcctgaccttaagaaacgctaagtatgggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tgctgcaacaagaaaaagaaacccatgcagcctgaccttaagaaacgctaagtatgggat 372
Query: 481 tgttggcaatgataacacgcagcaaacagcaagcgaactgactccccagtcggcgttgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgttggcaatgataacacgcagcaaacagcaagcgaactgactccccagtcggcgttgct 312
Query: 541 gagagaaattggtataggtttgaaatgtgttctttgaagattaggaatagccctttcaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gagagaaattggtataggtttgaaatgtgttctttgaagattaggaatagccctttcaaa 252
Query: 601 ttgtctattctatttttctattgctgcggatttgcacctaggcttctctta 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttgtctattctatttttctattgctgcggatttgcacctaggcttctctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_d09.g1 MSMg01no317_d09.g1 CHROMAT_FILE:
MSMg01no317_d09.g1 PHD_FILE: MSMg01no317_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:11 2005
(646 letters)
>mm_chr13_103473658_103474703
Length = 1046
Score = 1166 bits (603), Expect = 0.0
Identities = 636/647 (98%), Gaps = 1/647 (0%)
Strand = Plus / Plus
Query: 1 caggacagtcagggctatacagagaaaccctgtcttgaaaaacc-acaaagaaaaataca 59
||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct: 200 caggacagtcagggctatacagagaaatcctgtcttgaaaaaccaaaaaagaaaaataca 259
Query: 60 catgatccctctgagggtcagagtgatgaagacactccttcctgagcacagaggtccatg 119
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 catgatccctctgaaggtcagagtgatgaagacactccttcctgagcacagaggtccatg 319
Query: 120 gattcaagtttccaccaaatgcctgtcaacctcccgctccgaagatgcagtagttcctac 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 320 gattcaagtttccaccaaatgcccgtcaacctcccgctccgaagatgcagtagttcctac 379
Query: 180 tattgggtttgttttgttattggttgtaagtcagaagtcagaattgctcaatattagatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tattgggtttgttttgttattggttgtaagtcagaagtcagaattgctcaatattagatt 439
Query: 240 agaactagaaaatgcaagcatttccgcatttagttcttatatttttaattcaaatctaag 299
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 440 agaactagaaaatgcaatcatttccgcatttagttcttatatttttaaatcaaatctaag 499
Query: 300 aagcatgaattgctctaaaaaagcaacctccaccctctaatccttaccccatgtccccaa 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 500 aagcatgaattgctctaaaaaagcaacctccaccctctaatccttaccccatgtcctcaa 559
Query: 360 aaccctaaatatcctttaacatatcccaaccacacaggggactaacaggattatgtagac 419
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 560 aaccctaaatatcctttaacatatcccaaccacacaggggactaacgggattatgtagac 619
Query: 420 tgtgtcttatcagtcctgtttacagaaaagggaatttagtgagtctatgtgacacaaaac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgtgtcttatcagtcctgtttacagaaaagggaatttagtgagtctatgtgacacaaaac 679
Query: 480 aatgttcctctctccgataatcaggagtagggggtaagagtttggattccaggcttgcaa 539
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 680 aatgttcctctctccgataatcgggagtagggggtaagagtttggattccaggcttgcaa 739
Query: 540 aaactaatttgaaagggtttggtttttttatttgtttgtttggtttatgtatgtgaatac 599
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 740 aaactaatttgaaagggtttggtttttttatttgtttgtttgttttatgtatgtgaatac 799
Query: 600 actgtacactgtagctgtcttcagacacaccagaagagaccattgga 646
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 actgtacactgtagctgtcttcagacacaccagaagagaccattgga 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
