Query= MSMg01no318_c03.b1 MSMg01no318_c03.b1 CHROMAT_FILE:
MSMg01no318_c03.b1 PHD_FILE: MSMg01no318_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:15 2005
(275 letters)
>mm_chr13_59595087_59595762
Length = 676
Score = 474 bits (245), Expect = e-138
Identities = 269/277 (97%), Gaps = 4/277 (1%)
Strand = Plus / Minus
Query: 2 gaattctcttttcttttcacaaa-aaaactctagtgttttggaaggagaattctgaagtg 60
||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaattctcttttctttttaaaaataaaactctagtgttttggaaggagaattctgaagtg 362
Query: 61 tggagtgttgttctggaccttaagtacacagctaatggttatctgctgggcatctggtct 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 361 tggagtgttgttctggaccttaagtacacagctaagggttatctgctgggcatctggtct 302
Query: 121 gtagccacgggcggattattatctagggtggataattacataaacttgacatttgcattt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atagccacgggcggattattatctagggtggataattacataaacttgacatttgcattt 242
Query: 181 aaaaatcaaaacttcaaatttcaaatctaataatagcaagtttttaaaaa-a-atatata 238
|||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||
Sbjct: 241 aaaaatcaaaacttcaaatttcaaatctaataatagcaagtttt-aaaaatatatatata 183
Query: 239 atatgtttcctaacatgcaaacacccctttattacag 275
|||||||||||||||||||||||||||||||||||||
Sbjct: 182 atatgtttcctaacatgcaaacacccctttattacag 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 676
Length adjustment: 9
Effective length of query: 266
Effective length of database: 667
Effective search space: 177422
Effective search space used: 177422
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no318_c03.g1 MSMg01no318_c03.g1 CHROMAT_FILE:
MSMg01no318_c03.g1 PHD_FILE: MSMg01no318_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:15 2005
(318 letters)
>mm_chr13_59426106_59426823
Length = 718
Score = 553 bits (286), Expect = e-162
Identities = 310/318 (97%)
Strand = Plus / Plus
Query: 1 attaccgaaggctttgaaaggcaaccaatttggtctgtctggtgttttactaacaaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaccgaaggctttgaaaggcaaccaatttggtctgtctggtgttttactaacaaggga 260
Query: 61 gtaaaggagtttggaattagaaggcttcgcttatattccaagtatatgagatgttattat 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 gtaaaggagtttggaattagaaggcttcgcttctattccaagtatatgagatgttattat 320
Query: 121 gagcctgggaggattcttgatatcggtcaagaatagtgtataaagccctataacgcgtag 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 321 gagcctggaaggattcttgatatcggtcaagaatagtgtataaagccctataacgtgtgg 380
Query: 181 tttaaatgcactaccgagtgtgtgtgtgcacgcgcgtgcacatgtggacatctctcattg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 tttaaatgcactaccgagtgtgtgtgtgcacgcgcgtgcacatgtggacatctcgcattg 440
Query: 241 acagatgtcacatcttgaagacagatgacacaaccagaagacacttctcaggagtctgtt 300
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagatgtcacaaccagaagacagatgacacaaccagaagacacttctcaggagtctgtt 500
Query: 301 ctctcccttcccctgagg 318
||||||||||||||||||
Sbjct: 501 ctctcccttcccctgagg 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
