Query= MSMg01no318_p22.b1 MSMg01no318_p22.b1 CHROMAT_FILE:
MSMg01no318_p22.b1 PHD_FILE: MSMg01no318_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:16 2005
(347 letters)
>mm_chr13_34638568_34639314
Length = 747
Score = 594 bits (307), Expect = e-174
Identities = 328/335 (97%), Gaps = 2/335 (0%)
Strand = Plus / Minus
Query: 14 ttcctgcctgttgctggtaggccatcagcttttgtttggcaggtgatgcttccacacagc 73
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ttcctgcctgttgctgataggtcatcagcttttgtttggcaggtgatgcttccacacagc 688
Query: 74 acacaagagattattgctacactgcccaggaat-gacattgcaaaccatgggctaggccc 132
|||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 687 acacaagagattatcgctacactgcccaggaatag-cattgcaaaccatgggctaggccc 629
Query: 133 tcccacattgattagcaattaacaagatgcttcacagatgtaaccctggggaaaatctaa 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tcccacattgattagcaattaacaagatgcttcacagatgtaaccctggggaaaatctaa 569
Query: 193 cagaggcacctttcaactgagtctttagttggggccccttcttcacagatgtgtcaacta 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cagaggcacctttcaactgagtctttagttggggccccttcttcacagatgtgtcaacta 509
Query: 253 tgttgaccctatggcatatgaatagaaacttggtgcattcccccacccaaatggccattg 312
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 508 tgttgaccctatggcatatgaatagaaacttgatgcattcccccacccaaatggccattg 449
Query: 313 ctagttttattttgtagccattccaccactgcctc 347
|||||||||||||||||||||| ||||||||||||
Sbjct: 448 ctagttttattttgtagccatttcaccactgcctc 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_p22.g1 MSMg01no318_p22.g1 CHROMAT_FILE:
MSMg01no318_p22.g1 PHD_FILE: MSMg01no318_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:16 2005
(629 letters)
>mm_chr13_34468169_34469197
Length = 1029
Score = 1162 bits (601), Expect = 0.0
Identities = 622/629 (98%)
Strand = Plus / Plus
Query: 1 cagcatatctgaaggcttgcaagcaccagcttttgggagcagcctattggatcccactcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagcatatctgaaggcttgcaagcaccagcttttgggagcagcctattggatcccactcc 260
Query: 61 tccagaattatcagcagaaggctcttcccatgaagccaccatccttttgtaaaagcatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccagaattatcagcagaaggctcttcccatgaagccaccatccttttgtaaaagcatca 320
Query: 121 tcaacaatctagaaactacttcctgccctttggttattccagggctgtgtgctttgggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaacaatctagaaactacttcctgccctttggttattccagggctgtgtgctttgggtg 380
Query: 181 ggagatgctcttgccttaactattgttcagtgctttcctggatactgaggacatctctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagatgctcttgccttaactattgttcagtgctttcctggatactgaggacatctctgc 440
Query: 241 cccctcataatgtatatgacactctagtccttgcctcaactccaaactacttgaaaatga 300
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccctcataagggatatgacactctagtccttgcctcaactccaaactacttgaaaatga 500
Query: 301 tactcttacagagcatggaatgaccccatgccattttaatttgaacaccccaacgcttgt 360
||||||||||||||||||||||||||||||||||||||||||||| | | || ||||||
Sbjct: 501 tactcttacagagcatggaatgaccccatgccattttaatttgaagagcaaaaggcttgt 560
Query: 361 ctgtccaaagatattttcccacccttaaaactgatgttttaaactccgtgcaattaaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtccaaagatattttcccacccttaaaactgatgttttaaactccgtgcaattaaaag 620
Query: 421 tcacttgttaacctgtgtagttgttagaatataaagttgtggctgtgaggggaatccctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcacttgttaacctgtgtagttgttagaatataaagttgtggctgtgaggggaatccctg 680
Query: 481 aaagcaaggatagttatttggggagcttttaataaatactgatgtaaaatgcagaccagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaagcaaggatagttatttggggagcttttaataaatactgatgtaaaatgcagaccagc 740
Query: 541 caaacagatctctggggggatgggggagaggagaagatggcaagaggtttctagttccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caaacagatctctggggggatgggggagaggagaagatggcaagaggtttctagttccaa 800
Query: 601 aagacagtgaggattcacaacacttgcct 629
|||||||||||||||||||||||||||||
Sbjct: 801 aagacagtgaggattcacaacacttgcct 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
