Query= MSMg01no319_l11.b1 MSMg01no319_l11.b1 CHROMAT_FILE:
MSMg01no319_l11.b1 PHD_FILE: MSMg01no319_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:06 2005
(294 letters)
>mm_chr13_52534318_52535008
Length = 691
Score = 507 bits (262), Expect = e-148
Identities = 283/294 (96%), Gaps = 10/294 (3%)
Strand = Plus / Plus
Query: 1 attgatgaaatantccttgatgaaaaatccttgatgaaaaaaaaatctgttttttctttt 60
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 201 attgatgaaata-tccttgatgaaaaatccttgatgaaaaaaaaatc-gtttttt-tttt 257
Query: 61 catttcttcctgcctctatgctaacaatcgtttacacagctggtgagaaaatgtgctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 catttcttcctgcctctatgctaacaatcgtttacacagctggtgagaaaatgtgctctg 317
Query: 121 tggttctgcttagcttgctgtgttttgttactcccctattgattttgcctaggagtggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tggttctgcttagcttgctgtgttttgttactcccctattgattttgcctaggagtggca 377
Query: 181 aaatcatcttcagacccaaaaattgtctctaatgcgacagtcacgtgtccctatttctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aaatcatcttcagacccaaaaattgtctctaatgcgacagtcacgtgtccctatttctca 437
Query: 241 gatcattttttttttttttacattttaaaagggaaatggatagtcggcatgcct 294
|||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 438 gatcattttttt-------acattttagaagggaaatggatagtcggcatgcct 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 691
Length adjustment: 9
Effective length of query: 285
Effective length of database: 682
Effective search space: 194370
Effective search space used: 194370
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no319_l11.g1 MSMg01no319_l11.g1 CHROMAT_FILE:
MSMg01no319_l11.g1 PHD_FILE: MSMg01no319_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:06 2005
(343 letters)
>mm_chr13_52709835_52710577
Length = 743
Score = 601 bits (311), Expect = e-176
Identities = 335/343 (97%)
Strand = Plus / Minus
Query: 1 ctcagtgtgaaggggcctcggaggatgaaggatgtggtaaagagtctcgcctgtcaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 543 ctcagtgtgaaggggcctcggaggatgaaggatgtggtaaagagtctggcctgtcaaagt 484
Query: 61 ggcacttcaaaccgcgtgagtgcaggtaggctgggcttgctcttcagtgaggagggagct 120
|||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 483 ggcacttcaaaccgtgtgagtgcaggtaggctgtgcttgcttttcagtgaggagggagct 424
Query: 121 ttggtgcctactcccgttgacttggtcttccctgtcattcctccacaggcagctgggaga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 423 ttggtgcctactcccgttgacttggtcttccctgtcattcctccacaggcagctgggaaa 364
Query: 181 ttacggtgggaaataaacagagggtgaggaaggaaagagaagaggggaaggcttccagaa 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttacggtgggaaatgaacagagggtgaggaaggaaagagaagaggggaaggcttccagaa 304
Query: 241 ccttctgggctcacacctgagagaaggcggcagggcattactactaacacgggattcaag 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 303 ccttctgggctcacacctgagagaaggcagcagggcattactactaacacgggattcaag 244
Query: 301 agtgcatcccatcccaaaatggaggacttgctatacactggac 343
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 243 agtgcatcccatcccaaaatggaggacttgctgtacactggac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
