Query= MSMg01no319_o04.b1 MSMg01no319_o04.b1 CHROMAT_FILE:
MSMg01no319_o04.b1 PHD_FILE: MSMg01no319_o04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:17 2005
(373 letters)
>mm_chr13_9713595_9714367
Length = 773
Score = 673 bits (348), Expect = 0.0
Identities = 363/368 (98%)
Strand = Plus / Minus
Query: 6 gaattcagcacattatacacatgtagaatgtaaatttaagaatagtttttaaaacgattt 65
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 573 gaattcaacacattatatacatgtagaatgtaaatttaagaatagtttttaaaacaattt 514
Query: 66 atatttttgctctttttctgttatagttatatttgtcttagcttgttgttttaaatacct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atatttttgctctttttctgttatagttatatttgtcttagcttgttgttttaaatacct 454
Query: 126 taaacagaaatttcaatgcatctttgtgctattgggattttaacatgggaaatattttat 185
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 taagcagaaatttcaatgcatctttgtgctattgggattttaacatgggaaatattttat 394
Query: 186 tctccttatatatggaattaaatatatattctttgaatatttatccctaacctcaaactc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tctccttatatatggaattaaatatatattctttgaatatttatccctaacctcaaactc 334
Query: 246 agatacaaagaaaagtaaacaatcctttatttactgagtatcaagtaaatgctgaagatt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 agatacaaagaaaagtaaacaatcctttatttactgagtatcaagtaaatgctgaagatt 274
Query: 306 actagttgattagaaactagttacactagagttctctgtgatgttaaaccacggtttact 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 actagttgattagaaactagttacactagagttctctgtgatgttaaaccacggtttact 214
Query: 366 gagatgtg 373
||| ||||
Sbjct: 213 gagctgtg 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_o04.g1 MSMg01no319_o04.g1 CHROMAT_FILE:
MSMg01no319_o04.g1 PHD_FILE: MSMg01no319_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:17 2005
(346 letters)
>mm_chr13_9546380_9547125
Length = 746
Score = 248 bits (128), Expect = 5e-70
Identities = 134/136 (98%)
Strand = Plus / Plus
Query: 1 agtcattatccacatgcttgatatttgtgtatttgcttactagacaaactttatttgtaa 60
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 agtcattattcacatgcttgatatttgtgtatttgcttactagacaaaatttatttgtaa 260
Query: 61 taccctcaagtcagtggaaggttttctgtcatctatgaacatatgcagaaccccaaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taccctcaagtcagtggaaggttttctgtcatctatgaacatatgcagaaccccaaaatt 320
Query: 121 cttgtgcacttttgtg 136
||||||||||||||||
Sbjct: 321 cttgtgcacttttgtg 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
