Query= MSMg01no322_p16.b1 MSMg01no322_p16.b1 CHROMAT_FILE:
MSMg01no322_p16.b1 PHD_FILE: MSMg01no322_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:03 2005
(673 letters)
>mm_chr13_15709043_15710117
Length = 1075
Score = 1270 bits (657), Expect = 0.0
Identities = 670/675 (99%), Gaps = 2/675 (0%)
Strand = Plus / Plus
Query: 1 ttgttcagaatgcatgtgtccaactgatacctggaatgtctctttctcaagttgtaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 ttgttcagaatgcatgtgtccaactgatacctggaatgtctctttctcaggttgtaataa 260
Query: 61 tccccaattctatgtaaagttaaacacagtgttttagaaaaatcaccaaagtccacttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccccaattctatgtaaagttaaacacagtgttttagaaaaatcaccaaagtccacttag 320
Query: 121 catattgctgagcccatctggtgcctctgtgatatccctgagcccggacacacactgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catattgctgagcccatctggtgcctctgtgatatccctgagcccggacacacactgcag 380
Query: 181 aagagaacgggaaacgtgtccagtcctctctttgttccctggcttgagctgtttacacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagagaacgggaaacgtgtccagtcctctctttgttccctggcttgagctgtttacacca 440
Query: 241 gggctctataaccctgtggtcacactgttctatgctgtgggccttgataaagccctctag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggctctataaccctgtggtcacactgttctatgctgtgggccttgataaagccctctag 500
Query: 301 actacatgttactactgggttttaaaacttctttaaaaatggagacagttgttcagttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actacatgttactactgggttttaaaacttctttaaaaatggagacagttgttcagttat 560
Query: 361 atcttactatactcagatattcaagtgatttttttttt--acagccacaaagaatgtgct 418
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 atcttactatactcagattttcaagtgattttttttttttacagccacaaagaatgtgct 620
Query: 419 actgcattttgagtttgtgaacattttgagtttgtatgtacatttgagtgtgtgcatttt 478
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 actgcattttgagtttgtgaacattttgagtttgtgtgtacatttgagtgtgtgcatttt 680
Query: 479 gagtgtttgtgagttttgagtgtgtgtatgttttaagtgctggaagttacttgatcatgt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagtgtttgtgagttttgagtgtgtgtatgttttaagtgctggaagttacttgatcatgt 740
Query: 539 ttcatttcaaaagtaggcatgatgtatttttagaaactcaaattataaagacttttgaat 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttcatttcaaaagtaggcatgatgtatttttagaaactcaaattataaagacttttgaat 800
Query: 599 tctagtatgatttcattcacattcttgtggggtttccagggtgtgttgatatctattctg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tctagtatgatttcattcacattcttgtggggtttccagggtgtgttgatatctattctg 860
Query: 659 tatgtaaaaactctt 673
|||||||||||||||
Sbjct: 861 tatgtaaaaactctt 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1075
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1065
Effective search space: 706095
Effective search space used: 706095
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_p16.g1 MSMg01no322_p16.g1 CHROMAT_FILE:
MSMg01no322_p16.g1 PHD_FILE: MSMg01no322_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:03 2005
(294 letters)
>mm_chr13_15850024_15850717
Length = 694
Score = 561 bits (290), Expect = e-164
Identities = 293/294 (99%)
Strand = Plus / Minus
Query: 1 ttgaaccctgtatttggaagcacagcaacaatgttcagccttgtcctgatgcccactggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttgaaccctgtatttggaagcacagcaacaatgttcagccttgtcctgatgcccactggc 435
Query: 61 atcctatataattcattctgtcctgattatcttgttaggtagatgagacaattggggctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atcctatataattcattctgtcctgattatcttgttaggtagatgagacaattggggctc 375
Query: 121 cacagctaaagtaagtggtaagtagaaaggagcccccctctccatgtccaggtaactcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cacagctaaagtaagtggtaagtagaaaggagcccccctctccatgtccaggtaactcag 315
Query: 181 gcacttgcctttgccctcagagaggggcagctttgtcatcaggttcctctgaccagttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gcacttgcctttgccctcagagaggggcagctttgtcatcaggttcctctgaccagttat 255
Query: 241 ggctaggacttcatttcctaaacaggatgaagctatgttctggcatattctgag 294
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 254 ggctaggacttcatttcctaagcaggatgaagctatgttctggcatattctgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|