Query= MSMg01no323_g14.b1 MSMg01no323_g14.b1 CHROMAT_FILE:
MSMg01no323_g14.b1 PHD_FILE: MSMg01no323_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:55 2005
(568 letters)
>mm_chr13_60045337_60046307
Length = 971
Score = 1000 bits (517), Expect = 0.0
Identities = 557/571 (97%), Gaps = 3/571 (0%)
Strand = Plus / Plus
Query: 1 aactttgtatgtaaaagattaaataatcatttggaaatccttgtccaatcattaggaaac 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 aactttgtatgtaaaagattaaataatcatttggaaatctttgtccaatcattaggaaac 260
Query: 61 acaggtgatgttttccccttgaggtctatcaagacaagccagtcattttctaaacagagt 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagctgatgttttccccttgaggtctatcaagacaagccagtcattttctaaacagagt 320
Query: 121 attcatt--taaaaaaaaaaacatagattttctctcaataccactagacttgaccttagc 178
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attcattaaaaaaaaaaaaaacatagattttctctcaataccactagacttgaccttagc 380
Query: 179 cctaggaacaaatagcaagaatacattgtttaact-gtttttttcccctctgaaagagtt 237
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 381 cctaggaacaaatagcaagaatacattgtttaactggttttttttccctctgaaagagtt 440
Query: 238 aattgcagggtccttgtaattaacacaggtgtctatttccgtaggcatctctttctcatg 297
||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 441 aattgcagggttcttgtaattaacacaggtgtctacctccgcaggcatctctttctcatg 500
Query: 298 tctgttatgtaggatgggcaatcagaggcgaactgtttttcttagacttcatgttgtcct 357
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgttatgtaggatgagcaatcagaggcgaactgtttttcttagacttcatgttgtcct 560
Query: 358 tttggatctagcaaggggtgacgagagcttgctatgactccatctctggaacttagcaag 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 tttggatctagcaaggggtgacgagagcttgctatgactccatctctggaacttggcaag 620
Query: 418 gacatgcgtttggtggagcacctgctggtcacaggcttcctgatcctgctcgtcctaaca 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacatgcgtttggtggagcacctgctggtcacaggcttcctgatcctgctcgtcctaaca 680
Query: 478 gttggatctccccccacccccacccctaatcatacgcttgcctttcaattaggtcttgtt 537
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 681 gttggatctccccccacccccacccctaatcatatgcttgcctttcaattaggtcttgtt 740
Query: 538 ccatttccagaaatttacccaaataaactca 568
|||||||||||||||||||||||||||||||
Sbjct: 741 ccatttccagaaatttacccaaataaactca 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 971
Length adjustment: 10
Effective length of query: 558
Effective length of database: 961
Effective search space: 536238
Effective search space used: 536238
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_g14.g1 MSMg01no323_g14.g1 CHROMAT_FILE:
MSMg01no323_g14.g1 PHD_FILE: MSMg01no323_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:55 2005
(645 letters)
>mm_chr13_60209487_60210531
Length = 1045
Score = 1224 bits (633), Expect = 0.0
Identities = 642/645 (99%)
Strand = Plus / Minus
Query: 1 agatgttccaagcagtccttcaagaccaaagctgcatttgaagcctccccagggttgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 agatgttccaagcagtccttcaagaccaaagctgcatttgaagcctccccagggttgatg 630
Query: 61 agggaacctgactaaaggccatgattgccaggatggggatagcatgggacagtcggggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 agggaacctgactaaaggccatgattgccaggatggggatagcatgggacagtcggggct 570
Query: 121 gggaaatgcaacactcaacctagtggggactaaggagagaggaacggggccatcgctgca 180
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 569 gggaaacgcaacactcaacctagtggggactaagcagagaggaacggggccatcgctgca 510
Query: 181 taagactatggtaagagactcgatgcctgaaccagtcggattgggtgagcccagaagacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 taagactatggtaagagactcgatgcctgaaccagtcggattgggtgagcccagaagacc 450
Query: 241 acataaacatatctgctacccacttagctcaaagcatacttcctcaagcaatctcttccc 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 449 acataaacatatctgctacccacttagctcaaagcatacatcctcaagcaatctcttccc 390
Query: 301 tcttcaacatagttgggaacaggctgagttatgctgcagttacaaacggtcttgtagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tcttcaacatagttgggaacaggctgagttatgctgcagttacaaacggtcttgtagatt 330
Query: 361 cccctcaacctgcactttcattctccttgtttagttaccagcaaccacagccagttctac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cccctcaacctgcactttcattctccttgtttagttaccagcaaccacagccagttctac 270
Query: 421 actgttcagctgaagaattccataaacaattggtaagtcctaaatcatgtgatgaatccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 actgttcagctgaagaattccataaacaattggtaagtcctaaatcatgtgatgaatccg 210
Query: 481 cgactttccggacctgagccgctcctttgtccagtgtataggctacccatcagtcactta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 cgactttccggacctgagccgctcctttgtccagtgtataggctacccatcagtcactta 150
Query: 541 gtcatcttggttataggatcagcttctatagccatcaagtaactctattttaattaatca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gtcatcttggttataggatcagcttctatagccatcaagtaactctattttaattaatca 90
Query: 601 tgacccccaaagccaagaacgatgacggtggcatttgagtatgcc 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tgacccccaaagccaagaacgatgacggtggcatttgagtatgcc 45
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
