Query= MSMg01no324_b14.b1 MSMg01no324_b14.b1 CHROMAT_FILE:
MSMg01no324_b14.b1 PHD_FILE: MSMg01no324_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:19 2005
(685 letters)
>mm_chr13_72613169_72614253
Length = 1085
Score = 688 bits (356), Expect = 0.0
Identities = 377/384 (98%)
Strand = Plus / Minus
Query: 5 ggaattctctggccattccttgctcacctctagatgtgaaaagtaaagattctcatcccc 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ggaattctctggccagcccttgctcacctctagatgtgaaaagtaaagattctcatcccc 327
Query: 65 tcctctggctcctgcttccttttcatccaacctttggcatcagtgaggcgtggcatatcc 124
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 326 tcctctggctcctgcttccttttcatgcaacctttggcatcagtgaggcgtggcatatcc 267
Query: 125 ctttgtgttgtgtaggtgactgactggatacctagatgcacagaactagctccttaaaga 184
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 266 ctttgtgttgtgtaggtgactgactggatacctagatccacagaactagctccttaaaga 207
Query: 185 gttgtcatatttagagtgtccattgctgtgaacagactccatgaccaaagtctaataagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gttgtcatatttagagtgtccattgctgtgaacagactccatgaccaaagtctaataagg 147
Query: 245 acaacatgtaattggggctggcttacaggttcagaggctcagtccattatcatctatcag 304
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 146 acaacatgtaattggggctggcttacaggttcagagtctcagtccattatcatctatcag 87
Query: 305 gagcatggcagcattcaggcaggcatggtacaggtggacctgaaaattctacatcttcat 364
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 86 gagcatggcagcattcaggcaggcacggtacaggtggacctgaaagttctacatcttcat 27
Query: 365 ttgaaggctgttaggagaagactg 388
||||||||||||||||||||||||
Sbjct: 26 ttgaaggctgttaggagaagactg 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_b14.g1 MSMg01no324_b14.g1 CHROMAT_FILE:
MSMg01no324_b14.g1 PHD_FILE: MSMg01no324_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:19 2005
(664 letters)
>mm_chr13_72410817_72411878
Length = 1062
Score = 1137 bits (588), Expect = 0.0
Identities = 645/666 (96%), Gaps = 6/666 (0%)
Strand = Plus / Plus
Query: 1 tttctggaaag-aatccaaatatctatctatagagtcattatggaaatacagttatgtca 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctggaaagaaatccaaatatctatctatagagtcattatggaaatacagttatgtca 260
Query: 60 aatataagacaatctcccccagaccatcattttagaaagcaaaggagctgttcagtaata 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 aatataagacaatctcccccagaccatcattttagaaagcaaaggagctgttgagtaata 320
Query: 120 gttcagtaatagttactatggctttaaatgcaagaaaaacactgggtacgatatgatatt 179
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 321 gttcagtaatagttactatggctttaaatgcaagaaaaacactgggtaagatatgaaatt 380
Query: 180 agtgtttagttgataaagaaacagttcgggagggctgtacatagttgggggaaggtaaag 239
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 381 agtgtttagttgataaagaaacagtttgggaggactgtacatagttgggggaaggtaaag 440
Query: 240 ccaaaggacagaaagatggggcttattttgctatatattaactaaaagcaagcaaacaaa 299
||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 441 ccaaaggacagaaagatggggtttattttgctatatattaactaaaagcaag----caaa 496
Query: 300 caaacaaaaaaaagaaagctagcagaaaacagtatagtctgagtctgagacacagaaaga 359
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 497 caaacaaaaaaaagaaagctagcagaaaacagtatagtctgagtctgagatacagaaaga 556
Query: 360 tcacagacctggacagcctcaagggaggaaaataaccaaaggagacaggaggtgaactag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tcacagacctggacagcctcaagggaggaaaataaccaaaggagacaggaggtgaactag 616
Query: 420 gagctgaggagagtgtggggctgttctgacctgctaaattgtcctgcagtagtcagtaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gagctgaggagagtgtggggctgttctgacctgctaaattgtcctgcagtagtcagtaag 676
Query: 480 ggaacagagcttgatgggcagcggtgtgagcacagcctagcctctttgctggcactgtct 539
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 677 ggaacagagaatgatgggcagtggtgtgagcacagcctagcctctttgctggcactgtcc 736
Query: 540 caggctctacttctgaatgttcctctgtggtcacaggctctgctcatcccccagg-ttac 598
|||||| ||||||||||||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 737 caggctgtacttctgaatgttcctctgtcgtcacaggctctgctcatccccctgggttac 796
Query: 599 agatgctggttcaatcagtggggactgcttcccagttagagcctctggtcctggcctcac 658
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 797 agatgctggttcaatcagtggggactgcttcccagttaaagcctctggtcctggcctcac 856
Query: 659 gtctgg 664
||||||
Sbjct: 857 gtctgg 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1062
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1052
Effective search space: 688008
Effective search space used: 688008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
