Query= MSMg01no324_n01.b1 MSMg01no324_n01.b1 CHROMAT_FILE:
MSMg01no324_n01.b1 PHD_FILE: MSMg01no324_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:13 2005
(546 letters)
>mm_chr13_97441248_97442194
Length = 947
Score = 1029 bits (532), Expect = 0.0
Identities = 541/544 (99%), Gaps = 1/544 (0%)
Strand = Plus / Plus
Query: 4 gaattccctctgctctcccgctggctgaaggcctttatca-gcccttaactcaaacttgc 62
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 204 gaattccctctgctctcctgctggctgaaggcctttatcaagcccttaactcaaacttgc 263
Query: 63 aataacctctcctaactggtcttcccactctcgggtgcttacaccttctgcttctggcgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aataacctctcctaactggtcttcccactctcgggtgcttacaccttctgcttctggcgt 323
Query: 123 ttctgctgcagtaatcttcctcttatgccatacacctgcccctaaatcagcctccagtat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttctgctgcagtaatcttcctcttatgccatacacctgcccctaaatcagcctccagtat 383
Query: 183 ggcccaaccccatttcacctacacaactctatccctgtgttagcctagagtaacttaccc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggcccaaccccatttcacctacacaactctatccctgtgttagcctagagtaacttaccc 443
Query: 243 ttcgattgtactgaatcgcttttgacacccctgctcatggtcttagtttagcccggatat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttcgattgtactgaatcgcttttgacacccctgctcatggtcttagtttagcccggatat 503
Query: 303 acctacccactttaaattttgaaatcctaattatacctcaaggatcattcatatgccacc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acctacccactttaaattttgaaatcctaattatacctcaaggatcattcatatgccacc 563
Query: 363 tcctttcctgattctctcaaacatatgtcatatctctcttctgaacgcccatagcacttc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcctttcctgattctctcaaacatatgtcatatctctcttctgaacgcccatagcacttc 623
Query: 423 cgtaatagtctatgacttgtcttactgttttatgtggaaatgtcgtaaagagagcaattg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cgtaatagtctatgacttgtcttactgttttatgtggaaatgtcgtaaagagagcaattg 683
Query: 483 gtacataactccttttgtttttgtgcgctctctgtttctgtgtgtgtatgtgtgtgtgtg 542
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 684 gtacataactccttttgtttttgtgcgctctctgtttctgtgtgtgtgtgtgtgtgtgtg 743
Query: 543 tgtg 546
||||
Sbjct: 744 tgtg 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 947
Length adjustment: 10
Effective length of query: 536
Effective length of database: 937
Effective search space: 502232
Effective search space used: 502232
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_n01.g1 MSMg01no324_n01.g1 CHROMAT_FILE:
MSMg01no324_n01.g1 PHD_FILE: MSMg01no324_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:13 2005
(332 letters)
>mm_chr13_97599199_97599929
Length = 731
Score = 611 bits (316), Expect = e-179
Identities = 328/332 (98%), Gaps = 1/332 (0%)
Strand = Plus / Minus
Query: 1 gaccaatgcttcatgatttggggaaagaattctggagaaaacactccaggaaaaaaatgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 531 gaccaatgcttcatgatttggggaaagaattctggagaaaacactccagg-aaaaaatgt 473
Query: 61 ctcattacaaaattagtagtcaagcaattacgcacaccatcaaagcaaatgttagagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ctcattacaaaattagtagtcaagcaattacgcacaccatcaaagcaaatgttagagttt 413
Query: 121 acacacttttgtttctagctgaatattttatttgcaatttttatatgccttgaaatatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 acacacttttgtttctagctgaatattttatttgcaatttttatatgccttgaaatatga 353
Query: 181 ctgatttaatcatctacttcaatatgcttttatcaacaagttattgtttgtctcttctaa 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 352 ctgatttaatcatctacttcaatatgtttttatcaacaagttattgtttgtctcttctaa 293
Query: 241 tgtggttaggtttctgaaagtgagctctgctctaaagaacttgacttgctgctctgtggc 300
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tgtgattaggtttctgagagtgagctctgctctaaagaacttgacttgctgctctgtggc 233
Query: 301 cgttgggactgagtgaaagcagcaccaggtca 332
||||||||||||||||||||||||||||||||
Sbjct: 232 cgttgggactgagtgaaagcagcaccaggtca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 731
Length adjustment: 9
Effective length of query: 323
Effective length of database: 722
Effective search space: 233206
Effective search space used: 233206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
