Query= MSMg01no325_f20.b1 MSMg01no325_f20.b1 CHROMAT_FILE:
MSMg01no325_f20.b1 PHD_FILE: MSMg01no325_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:52 2005
(625 letters)
>mm_chr13_116533646_116534670
Length = 1025
Score = 1123 bits (581), Expect = 0.0
Identities = 611/623 (98%), Gaps = 4/623 (0%)
Strand = Plus / Minus
Query: 4 ggaattctaaagctgggtatatctctgagatctttaagatgtgaagttttgtggattatt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 ggaattctaaagctgggtatatctctgagatctttaagatgtgaagttttgtggattatt 729
Query: 64 atctttaaaacactgatttattttgtagagtatacttaaaactcatcagttgctgtggcc 123
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 atctttacaacactgatttattttgtagagtatacttaaaactcatcagttgctgtggcc 669
Query: 124 cacagtgtaacgaaataatctctatcctgtctatgagggattaagatgcaattattgtac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cacagtgtaacgaaataatctctatcctgtctatgagggattaagatgcaattattgtac 609
Query: 184 ccagggtaaaggttgctggatccttaacattatgatggtgtgggttaagagaaaagaact 243
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 608 ccagggtaaaagttgctggatccttgacattatgatggtgtgggttaagagaaaagaact 549
Query: 244 ccaatgctttgctgtagcaggatgctttatcggcatttcatgtgtttcctaaatgccagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ccaatgctttgctgtagcaggatgctttatcggcatttcatgtgtttcctaaatgccagt 489
Query: 304 tagcatgcagactccagtgtatggctttttcaaactttgaaccaatcctgtaaggctgac 363
||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 488 tagcatgcagactccagcgtatggatttttcaaactttgaaccaatcctataaggctgac 429
Query: 364 atgaaatcacttttataggatactgaggacaacttacctcctgaataaatttgcagatgt 423
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 428 atgaaatcacttttataggatactgaggacaacttacctcctgaatgaatttgcagatgt 369
Query: 424 ccattggtccccaatcactatctaaatgtaatgtttagaccggggttttaacaatccttt 483
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 368 ccattggtccccaatcactatctaaatgtaatgcttagaccggggttttaacaatccttt 309
Query: 484 tcataaaatcctaccttaaacacttaaagccatcagataacaaccagatgactaaataaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tcataaaatcctaccttaaacacttaaagccatcagataacaaccagatgactaaataaa 249
Query: 544 tttcagtagccgtttggtacatttttctctaaactggctgctggg----ttttttttttt 599
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 248 tttcagtagccgtttggtacatttttctctaaactggctgctggggtttttttttttttt 189
Query: 600 tctttctgcttctattttttttt 622
|||||||||||||||||||||||
Sbjct: 188 tctttctgcttctattttttttt 166
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_f20.g1 MSMg01no325_f20.g1 CHROMAT_FILE:
MSMg01no325_f20.g1 PHD_FILE: MSMg01no325_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:52 2005
(656 letters)
>mm_chr13_116475763_116476817
Length = 1055
Score = 1176 bits (608), Expect = 0.0
Identities = 646/664 (97%), Gaps = 10/664 (1%)
Strand = Plus / Plus
Query: 3 cttaaggcacagcattcgttcatattcttcaccttgaagttcatgtgaacccagtggatt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cttaaggcacagcattcgttcatattcttcaccttgaagttcatgtgaacccagtggatt 251
Query: 63 tgctcctttaggaacttagtgcctgacaaatacagaggtggttgctctcagccaaccatt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgctcctttaggaacttagtgcctgacaaatacagaggtggttgctctcagccaaccatt 311
Query: 123 ggactgagcatggggtccccaatggaggagttaaagaaaggactgaaggagctgaagggg 182
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 312 ggactgagcatggggtccccaatggaggagttagagaaaggactgaaggagctgaagggg 371
Query: 183 ttagcagccccataggacgaacaacagtatgaaccaaccagaacccccgagctcccaggg 242
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tttgcagccccataggacgaacaacagtatgaaccaaccagaacccccgagctcccaggg 431
Query: 243 actaaaccaccaaccaaagggtacacatggagggactgtgtctccagtcacatatgtaac 302
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 432 actaaaccaccaaccaaagggtacacatggagggactgtggctccagtcacatatgtaac 491
Query: 303 agaggatggccttgttgtacatcaatgggaggagaggaccttggccctgtgaagagggga 362
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 492 agaggatggccttgttgtacatcaatgggaggtgaggaccttggtcctgtgaagagggga 551
Query: 363 atccaggaaaggtggataacatttgaaatgtaaataaagaaaatatctaatttttaaaag 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 atccaggaaaggtggataacatttgaaatgtaaataaagaaaatatctaatttttaaaaa 611
Query: 423 ag--aaaaaaaaaagaactaaaaaagccactcccatcatccatggtccatggatgaacat 480
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aggaaaaaaaaaaagaactaaaaaagccactcccatcatccatggtccatggatgaacat 671
Query: 481 ccactcaatggagcaaagatgaagatc--------ctattatacaattggaatgtccccg 532
||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 672 ccactcaatggagcaaagatgaagatctattagatctattatacaattggaatgtccccg 731
Query: 533 aaattgtaatatttgagttaaatttggctactaaggattctgtgacctcagtcatatttg 592
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 732 aaattgtaatatttgagttaaatttggctactaaggattctgtgacctcagtgatatttg 791
Query: 593 ttgttgtgaagactcaaccgtctgccatccctgtacttgttcttacccatttggctgtgg 652
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 792 ttgttgtgaagactcaaccgtctgccatccctgtactcgttcttacccatttggctgtgg 851
Query: 653 aaaa 656
||||
Sbjct: 852 aaaa 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1055
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1045
Effective search space: 675070
Effective search space used: 675070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
