CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTAATCTCCATAGTCACACTACAGATAAAATTAGTAAGAGAGCT
CAAGAGATAATACCTAGAAAGAAGGTAAAAATGAACAGGTAAGAATTGGA
GCATAAAATACATGTAATTTGAATTCAAAAGAGGAAGTGAGAGAAAGTGG
TTTGTTATTATTTAAAATGTTAGTAGCTGTGAACAGATTAAAGGTATCAA
GCCATCAGTTTAAAAAGAACCAGATGAACTATAACTGGGATAGAATTGTA
AGACCTCAAGGTAAAACAGAAAACTAAGGAAGTAAGAAAACTTGTCAGAG
AAACAGAAGTAGTTGCTGTCTACAGAGTGATGTTTTGACTTCTAACTTCC
AAACAGAAAGAGTAAGATCCAAACCCAATAGAAAAATATACCTGAAGAAA
CAAAAAAGAAAAATCTCCAGGACATTGGTAGTATACAATCAGCCACCTAA
ACCTGAAACTAATAAGATGACAGAGAATAATGACGATAGCAAGTTAAGCC
ACCATTAAGTAGGCCTGCATCACAAATAAGAAACAATGCATTCCACAAAC
TGTGCAGAGCAGATAAAGTCCTGAGTGAATTCGTATTGACGTGAGCACAT
CTATGTCTAGGGCCTCAGTGTCAAAGACTACCAGGTCAGGATCAGAGAAA
TGGCAACCAAG

GCGGCGGGGGGGNGGCGGCGNAGAANACGACAANCCCCCCNNCCANCNNN
NNNCCCCAATGATATGGGTAGGCCTGGNGGNCGCCGGTTTCGCGACCCGC
AGGNGNAACNANAGAATTATCAACAGCAAGCGNCNCCANGNAANCANCAA
GACAGGCNAAAGAAACCCNNNCACGGAACCCANACANCCNAANCNAGNAG
NNAACAAAAACAAAAAACAAAAAACAAAAAACAAAAAAAAAAAAAAAAGG
AAGCAACAACCANNGGCAAAGAACNNCCAACAGGGGNNCCAAGCNAGAAG
NNNGAGGNCTTGGTAANANCANCAAGNANCANCAGAGAAGGAAANAGAGG
GAGAAANAAACCCNCNCCCAAAGNCATATTTTTTTTCTGTCAGGGANCAA
CNCGGCNCNCAAAAANNCNAAACCTGACCACCCCACAACCCAGGNAAGCA
AANACCNNNGNAAACAAAAGACAGGGAACAAACACAACAANNAAAGCNCG
AGACNCCNNGCTCCCACNAACCGGGAGCTTCCAAGNCAGACAAAGNACAT
ATGCAGNAAGGGNTCCAATGCATGAACGCTGCCCCTGCATTTCAAGGGAG
GACTCACCAACATCATCAGGACAGACTGGCTCTAGTGGACCTTCTCCACT
TCACTCATGACATTGTACCCATGCCAGGGATTCCATGCAGCACAAAACCT
GACCTACTAAGACTTATCTTCTCGGGCTGGNGAGATGGCTCAGCGGTTAA
GAGCACTGACTGCTCTT

Query= MSMg01no326_f21.b1 MSMg01no326_f21.b1 CHROMAT_FILE:
MSMg01no326_f21.b1 PHD_FILE: MSMg01no326_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:04 2005
         (644 letters)



>mm_chr13_15466391_15467434
          Length = 1044

 Score = 1230 bits (636), Expect = 0.0
 Identities = 642/644 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtcacactacagataaaattagtaagagagctcaagagataatacctagaaagaaggta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtcacactacagataaaattagtaagagagctcaagagataatacctagaaagaaggta 260

                                                                       
Query: 61  aaaatgaacaggtaagaattggagcataaaatacatgtaatttgaattcaaaagaggaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaatgaacaggtaagaattggagcataaaatacatgtaatttgaattcaaaagaggaag 320

                                                                       
Query: 121 tgagagaaagtggtttgttattatttaaaatgttagtagctgtgaacagattaaaggtat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagagaaagtggtttgttattatttaaaatgttagtagctgtgaacagattaaaggtat 380

                                                                       
Query: 181 caagccatcagtttaaaaagaaccagatgaactataactgggatagaattgtaagacctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagccatcagtttaaaaagaaccagatgaactataactgggatagaattgtaagacctc 440

                                                                       
Query: 241 aaggtaaaacagaaaactaaggaagtaagaaaacttgtcagagaaacagaagtagttgct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggtaaaacagaaaactaaggaagtaagaaaacttgtcagagaaacagaagtagttgct 500

                                                                       
Query: 301 gtctacagagtgatgttttgacttctaacttccaaacagaaagagtaagatccaaaccca 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 gtctacagagtgatgttttgacttctaacttccaaacagaaagagtaagatctaaaccca 560

                                                                       
Query: 361 atagaaaaatatacctgaagaaacaaaaaagaaaaatctccaggacattggtagtataca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atagaaaaatatacctgaagaaacaaaaaagaaaaatctccaggacattggtagtataca 620

                                                                       
Query: 421 atcagccacctaaacctgaaactaataagatgacagagaataatgacgatagcaagttaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atcagccacctaaacctgaaactaataagatgacagagaataatgacgatagcaagttaa 680

                                                                       
Query: 481 gccaccattaagtaggcctgcatcacaaataagaaacaatgcattccacaaactgtgcag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gccaccattaagtaggcctgcatcacaaataagaaacaatgcattccacaaactgtgcag 740

                                                                       
Query: 541 agcagataaagtcctgagtgaattcgtattgacgtgagcacatctatgtctagggcctca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agcagataaagtcctgagtgaattcgtattgacgtgagcacatctatgtctagggcctca 800

                                                       
Query: 601 gtgtcaaagactaccaggtcaggatcagagaaatggcaaccaag 644
           |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 801 gtgtcaaagactaccaggtcaggaccagagaaatggcaaccaag 844


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space:   655556
Effective search space used:   655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no326_f21.g1 MSMg01no326_f21.g1 CHROMAT_FILE:
MSMg01no326_f21.g1 PHD_FILE: MSMg01no326_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:04 2005
         (204 letters)



>mm_chr13_15624483_15625086
          Length = 604

 Score =  296 bits (153), Expect = 6e-85
 Identities = 190/204 (93%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctcccacnaaccgggagcttccaagncagacaaagnacatatgcagnaagggntccaat 60
           |||||||| |||| |||| |||| ||  |||||||| |||| ||||| ||||| ||||||
Sbjct: 404 gctcccactaacctggagattcctagttagacaaagtacatgtgcagtaagggttccaat 345

                                                                       
Query: 61  gcatgaacgctgcccctgcatttcaagggaggactcaccaacatcatcaggacagactgg 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gcatgaacgctgctcctgcatttcaagggaggactcaccaacatcatcaggacagactgg 285

                                                                       
Query: 121 ctctagtggaccttctccacttcactcatgacattgtacccatgccagggattccatgca 180
           ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 284 ctctagtggaccttctccagttcgctcatgacactgtacccatgccagggattccatgca 225

                                   
Query: 181 gcacaaaacctgacctactaagac 204
           ||||||||||||||||||||||||
Sbjct: 224 gcacaaaacctgacctactaagac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space:   116816
Effective search space used:   116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)