Query= MSMg01no326_o05.b1 MSMg01no326_o05.b1 CHROMAT_FILE:
MSMg01no326_o05.b1 PHD_FILE: MSMg01no326_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:40 2005
(498 letters)
>mm_chr13_59660083_59660980
Length = 898
Score = 847 bits (438), Expect = 0.0
Identities = 479/494 (96%), Gaps = 3/494 (0%)
Strand = Plus / Plus
Query: 5 ggaattcaaatgatttccaaacctcactcattgtgtggcaataaactaatgaccagaggg 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 208 ggaattcaaatgattttgaaacctcactcattgtgtggcaataaactaatgactagaggg 267
Query: 65 aagcatgactcagtgacaggatacatgctttgcatggctggggccccagttcaataccaa 124
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 268 aagcatgactcagtgaccggatacatgctttgca---ctggggccccagttcaataccaa 324
Query: 125 ccgccacaaaaataacttgtaaaaaagagtcatcagatgtaggtcagtctagatcgctta 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgccacaaaaataacttgtaaaaaagagtcatcagatgtaggtcagtctagatcgctta 384
Query: 185 actggcacacctcagcctggcaactcacagattctgtacaacttcacttatttcggcttt 244
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 385 actggcacacctcagcctggcaactcagagattctgtacaacttcacttatttcggcttt 444
Query: 245 agtggtagagagcatggctccatctctcttgatgtctttacctcttaaatctttaatact 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 agtggtagagagcatggctccatctctcttgatttctttacctcttaaatctttaatact 504
Query: 305 gtggcttacaaaatgcaacatacttaataatgaaactgtagctgaaagatctagaatatc 364
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtggcttacaaaatgcaacaaacttaataatgaaactgtagctgaaagatctagaatatc 564
Query: 365 catggacctccccaaaagtatggtttccgtggggagcataaatgttgggacagcagttcg 424
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catggacctctccaaaagtacggtttccgtggggagcataaatgttgggacagcagttcg 624
Query: 425 gtcctggatttctgaaacctggtgggtcctccggaattgcaagactgttatagttcttcg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 625 gtcctggatttctgaaacctggtgggtcctccggaattgcaagactgttatagctcttcg 684
Query: 485 tcatattcaacaat 498
|||||||||||||
Sbjct: 685 ccatattcaacaat 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_o05.g1 MSMg01no326_o05.g1 CHROMAT_FILE:
MSMg01no326_o05.g1 PHD_FILE: MSMg01no326_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:40 2005
(338 letters)
>mm_chr13_59838149_59838886
Length = 738
Score = 638 bits (330), Expect = 0.0
Identities = 336/338 (99%)
Strand = Plus / Minus
Query: 1 tggcgggattttggttgaggctgtcggtcacacgcttgctgattactggctggggtcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tggcgggattttggttgaggctgtcggtcacacgcttgctgattactggctggggtcctt 479
Query: 61 cctccatgtcctgcagatgggcataccccatgtggtagcaacttcatcaaaggcagggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cctccatgtcctgcagatgggcataccccatgtggtagcaacttcatcaaaggcagggga 419
Query: 121 ggagagattttgctagcaagacagaaacaccaatcgtgttacacactgcaagagctcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ggagagattttgctagcaagacagaaacaccaatcgtgttacacactgcaagagctcctt 359
Query: 181 catggtggctatggttctagttctgaaactagtttataaaaacgggctctgttataaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 catggtggctatggttctagttctgaaactagtttataaaaacgggctctgttataaatt 299
Query: 241 tgaaggccttgggtgggtcacttgtaggaagcatcaagattcgttgtaggatcagataaa 300
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 298 tgaaggccttgggtgggtcacctgtaggaagcagcaagattcgttgtaggatcagataaa 239
Query: 301 atttgcatgcagccctactgtgtgggaagctgagagaa 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atttgcatgcagccctactgtgtgggaagctgagagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
