NAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTTTGTTCTTCTTCACTTGATTTGTTTGTTTGTTTGTTTG
TATGTTATAGTGGTGCATATCAATATTTTTTTCCACAGGAAGAACAAGAT
GCTACTTTCAGTCTTCATCTATTTCCTCATGGCTGGTATTCTCTCCATTC
GTCTCCAGTCATCAGCTAATAAAACAACTTTCACAGCCATGGCATGGGTA
ATACATTTTCTTACCTTGAACAGTTTGAAAAAAGAAGCTTAACAAAAACT
CATGGCTTTGATATAACTGTCAAATCTCCTCATTTTAAATTATTGTCTTT
CCCAAGTCTCTAACAATCAATTGAATTTTTACTTTTTCCCATTAGATTTA
CTCCCTGGAAATGTTCTTTGCCCACACATCCTTGATAATCAATGAGCAGA
AACAAGCCACAATTATGTTATTTTTGTTTAGACATTGTATATTCCCCTAA
AGTTAGAGGCCAATTATGTAAAAAAAAAAAAAATCACTTACTCATCCAGA
AGAATTCTATCTTCTCTGAACACTTACTGGATGATAGACATGAATTGTTT
TAAAATAGATGGAATTTACAGGGATTTGTGGTCTGAGTTTAAGTGATCTG
TGTCATGTCCTCTGCCAGATGGAATCCCCAATCACCAAAAAGTATTTACT
TATATTTTAACTTATCCCCTTTCTCCCTGGCTTTGCATN

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTTTGTAGACCAGGCTGGCC
TCAAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAG
GCATGCACCACCAAGGCCCAGTGAATCAATTGTTTTAAAGATGGTATAAA
GTCTGCAGGAGACTCATATTCTGTCTAATGTGGGCTCCATGGGAATTTTG
GGTTTAAATCCTGACATGACAAATTAGAAAGGTGTAAATAGGCTAAAATG
TGGGTGATTTTGAGTATTGTGTTTGCTTTATTGTTCCTCTGGGAAAAGGG
CAAGCTACAGGTTTTCCTGGTTACCAGCTGAAGGCTATGCTGATTTGGGG
AAAAGATTTTGTCTTTGTGTCCCCGCAGAAGGTGATTAAGGTATTTACAC
TTTCCTGAGTTATATGGATCAGATTTGATAGAGGGAGATCCCTGAGAACT
AGATTTCAGAGAATCATACGAAAAGTTTATCTTCATGATACTAAGATTTT
GTTTTGAGATTTATATGTTACAGAATATACAGCTTTGGTGAATGTCATCG
TCAGACATGCTGAACTGACCTGCCTGAACTCCTGATGTCTTGGTTTTTCA
TCTGGATCCAGTCAAGACACAGACATCATAGACTAATACCATCATTAGTA
TGGTTTTCTTAACTTCAATTATTTCCCCCATTTTGCTA

Query= MSMg01no327_c17.b1 MSMg01no327_c17.b1 CHROMAT_FILE:
MSMg01no327_c17.b1 PHD_FILE: MSMg01no327_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:01 2005
         (680 letters)



>mm_chr13_87446583_87447664
          Length = 1082

 Score = 1203 bits (622), Expect = 0.0
 Identities = 664/678 (97%), Gaps = 2/678 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttttgttcttcttcacttgatttgtttgtttgtttgtttgtatgttatagtgg 64
           |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 935 gaattctttttgttattcttcacttgatttgtttgtttgtttgtttggatgttatagtgg 876

                                                                       
Query: 65  tgcatatcaa-tatttttttccacaggaagaacaagatgctactttcagtcttcatctat 123
           |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 tgcatatcaattttttttttccacaggaagaacaagatgctactttcagtcttcatctat 816

                                                                       
Query: 124 ttcctcatggctggtattctctccattcgtctccagtcatcagctaataaaacaactttc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ttcctcatggctggtattctctccattcgtctccagtcatcagctaataaaacaactttc 756

                                                                       
Query: 184 acagccatggcatgggtaatacattttcttaccttgaacagtttgaaaaaagaagcttaa 243
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 755 acagccatggcatgggtaatacattttcttaccttgaacactttgaaaaaagaagcttaa 696

                                                                       
Query: 244 caaaaactcatggctttgatataactgtcaaatctcctcattttaaattattgtctttcc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 695 caaaaactcatggctttgatataactgtcaaatctcctcattttaaattatcgtctctcc 636

                                                                       
Query: 304 caagtctctaacaatcaattgaatttttactttttcccattagatttactccctggaaat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 caagtctctaacaatcaattgaatttttactttttcccattagatttactccctggaaat 576

                                                                       
Query: 364 gttctttgcccacacatccttgataatcaatgagcagaaacaagccacaattatgttatt 423
           ||||||||   | ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gttctttgtttagacatcctcgataatcaatgagcagaaacaagccacaattatgttatt 516

                                                                       
Query: 424 tttgtttagacattgtatattcccctaaagttagaggccaattatgt-aaaaaaaaaaaa 482
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 515 tttgtttagacattgtatattcccctaaagttagaggccaattatgtaaaaaaaaaaaaa 456

                                                                       
Query: 483 aatcacttactcatccagaagaattctatcttctctgaacacttactggatgatagacat 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aatcacttactcatccagaagaattctatcttctctgaacacttactggatgatagacat 396

                                                                       
Query: 543 gaattgttttaaaatagatggaatttacagggatttgtggtctgagtttaagtgatctgt 602
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 395 gaattgttttaaaatagatggaatttacagggatttgtggtctgagttgaagtgatctgt 336

                                                                       
Query: 603 gtcatgtcctctgccagatggaatccccaatcaccaaaaagtatttacttatattttaac 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gtcatgtcctctgccagatggaatccccaatcaccaaaaagtatttacttatattttaac 276

                             
Query: 663 ttatcccctttctccctg 680
           ||||||||||||||||||
Sbjct: 275 ttatcccctttctccctg 258


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1082
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1072
Effective search space:   718240
Effective search space used:   718240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)