ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAAGGCTATTACCCCACTTACTCATCTATCAGATTCAGTGTAGTTGGCT
TTATGTTGAGGTTTTTAATCAATTTTGATTGAATTTTGTGCAAAATTATA
ACTACATGTCTACTTGGACTCTTTCACATGCAGTTGTCCAGTTTGACAAA
AAACATTAGTTAACAATATTGTGTTTTGTTCTAGTATATTTGTCTTTGTT
ATAAAAACGAACAAACAGGTATTCATAGGTGTATGGATTCATGTTTAGTT
CTTAAATTCTAGTTCATTGATCAATATGTCTATATTTTAGTCAATACCAG
GGAGTTTTTATTGTTACAGCTCTGTAATATAGGTTGAGGTCAGAATGGTG
ATGCTGTCAGCACATCCTGCATTATTCTGGATTCTTTTAAAATTTAATTA
TTCTGAGTTTTTTGTGTTTCCCTAGGACGTTGAAAATTGTGTGCTGTCAC
TCACGCTGCTGCTGAAGCTTCCTGTGAGTCAGCTTTGCTCCTGTAATTTA
TATCTTACCCATATTACAGTACATACCTCCAATAAAACTCATTAGATTAC
CAAACTGGACTGGAATGGTATCTGTACTTTGGTCTGTTGTGGGGTTTCTA
TTTGCGGTGAGTATTATGATCTCTCTACCAAATCCCAGTGTACTAAATAA
GCTCCAACCCAGAGCTCACTCTTAACAT

AATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCATGTACTACTCCTAGAGCTCTGTAA
AATGAGAGTGTATTAAAAAGTCACTCTACTGCCACTGAAATCCTATGATC
TTCTGGGTCATTGGTTTTTTGTTTTTATGCTGGAAAAATTTCACTTTGAA
GGAGTTGGAGACATTTCTGTTATGTTTGTTTCAGAATGTACAGGGACTTC
TGATCTTATTTAGATTTATTTTAGACTTAATTTAAAATTTAAGAATTGAA
AAAATTAAGTACTATCAAAATTCAAGGCCATCATTTTCTCACAGGTATTG
AATTATGATATTGAGCATGAAACATTAGAAATTCATCTCTGAGAGTAGAG
AAAACTCATTTTTTTTTCTGTACTGAGAGCTTGATACTTTTATTTTTGAG
ATTGTAATATAACTACGTCACTCTCCTTTCCTTTTCCTCCCTCCAATTTT
TCCCATACACCCATTTCCTTCATCTTTTTTTCACTAAGTACCATGGGATG
TATATATGCATATATCGTCTGGATAGCGACATTTGTATATATGTCTTTAG
GATTGACTGATTGATTACCAACTGATATGGTCCCAGATTCTCGGAATAGC
TGGCTCCCTGATGCATTTGACCAGGTCTCTCACTACATCATATCTAACTG
GTTGGATGGTACTTCCCACTCACCGTTCCCCA

Query= MSMg01no328_e04.g1 MSMg01no328_e04.g1 CHROMAT_FILE:
MSMg01no328_e04.g1 PHD_FILE: MSMg01no328_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:22 2005
         (381 letters)



>mm_chr13_84840691_84841471
          Length = 781

 Score =  716 bits (370), Expect = 0.0
 Identities = 376/378 (99%), Gaps = 2/378 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   tactactcctagagctctgtaaaatgagagtgtattaaaaagtcactctactgccactga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tactactcctagagctctgtaaaatgagagtgtattaaaaagtcactctactgccactga 522

                                                                       
Query: 65  aatcctatgatcttctgggtcattggttttttgtttttatgctggaaaaatttcactttg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aatcctatgatcttctgggtcattggttttttgtttttatgctggaaaaatttcactttg 462

                                                                       
Query: 125 aaggagttggagacatttctgttatgtttgtttcagaatgtacagggacttctgatctta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aaggagttggagacatttctgttatgtttgtttcagaatgtacagggacttctgatctta 402

                                                                       
Query: 185 tttagattta-ttttagacttaatttaaaatttaagaattgaaaaaattaagtactatca 243
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tttagatttatttttagacttaatttaaaatttaagaattgaaaaaattaagtactatca 342

                                                                       
Query: 244 aaattcaaggccatcattttctcacaggtattgaattatgatattgagcatgaaacatta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aaattcaaggccatcattttctcacaggtattgaattatgatattgagcatgaaacatta 282

                                                                       
Query: 304 gaaattcatctctgagagtagagaaaactcatttttttttctgtactgagagcttgatac 363
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 281 gaaattcatctctgagagtagagaaaactca-ttttttttctgtactgagagcttgatac 223

                             
Query: 364 ttttatttttgagattgt 381
           ||||||||||||||||||
Sbjct: 222 ttttatttttgagattgt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space:   287184
Effective search space used:   287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)