Query= MSMg01no330_b09.b1 MSMg01no330_b09.b1 CHROMAT_FILE:
MSMg01no330_b09.b1 PHD_FILE: MSMg01no330_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:44 2005
(655 letters)
>mm_chr13_93167411_93168466
Length = 1056
Score = 1191 bits (616), Expect = 0.0
Identities = 643/652 (98%), Gaps = 1/652 (0%)
Strand = Plus / Plus
Query: 5 gaattccaggcttgtcagggcttcatagaaagatcttgtctcaaaacagaaggaagggct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggcttgtcagggcttcatagaaagatcttgtctcaaaacagaaggaagggct 264
Query: 65 tgcctcgtttttgatagtcttctgtatagcccaggctgacccttcaaactcatactcttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcctcgtttttgatagtcttctgtatagcccaggctgacccttcaaactcatactcttc 324
Query: 125 aggcctccacctcccgagtgttaagattacaggtgcatgacaccacaccccttttgtgca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggcctccacctcccgagtgttaagattacaggtgcatgacaccacaccccttttgtgca 384
Query: 185 gagctgaagacaaactcaggaccgcacacacccaagcaagcactctgtccactgtgccac 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 385 gagctgaagacaaactcaggaccgcacacacccaagcaagcactctgtccactgcgccac 444
Query: 245 attgcccagcctgcaggatactttttgtaaagatcaatctgtctggatgttctgcttcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attgcccagcctgcaggatactttttgtaaagatcaatctgtctggatgttctgcttcca 504
Query: 305 ttctatctaaatagtatgactaccatattctggaggctttggtttataacaggctcttaa 364
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 505 ttctatctaaatagtatgacaaccatattctggaggttttggtttataacaggctcttaa 564
Query: 365 ttgtcacctcctttctctattttttactgattttttttt-caagcagagatcaccaatga 423
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 565 ttgtcacctcctttctctattttttactgattttttttttcaagcagagatcaccaatga 624
Query: 424 agggtaaagtcaaattccttgtttggttggttttgtttctcgaggcagactttctctgtg 483
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agagtaaagtcaaattccttgtttggttggttttgtttctcgaggcagactttctctgtg 684
Query: 484 tagccctaactacatcgagaaagtaagttcaggctaacctcaagctcagaaatctgtctg 543
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 685 tagccctaactacatcgagaaagtaagttcaggttaacctcaagctcagaaatctgtctg 744
Query: 544 cctctgcctcccaagtgtcgggactgaaggcatgtgccaccacgctggctgtgaagccta 603
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 745 cctctgcctcccaagtgtggggactgaaggcatgtgccaccacgctggctgtgaaaccta 804
Query: 604 acttttaaggctgtcccttctaggccattgaaattccaacttaagcagggta 655
|||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 805 acttttaaggctgtcccttctaggccattgaaattccagcttaagcagggta 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space: 674670
Effective search space used: 674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_b09.g1 MSMg01no330_b09.g1 CHROMAT_FILE:
MSMg01no330_b09.g1 PHD_FILE: MSMg01no330_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:44 2005
(599 letters)
>mm_chr13_93335876_93336874
Length = 999
Score = 1104 bits (571), Expect = 0.0
Identities = 592/599 (98%), Gaps = 1/599 (0%)
Strand = Plus / Minus
Query: 1 tttggagtttaggtaattatattttttactgtagtggtagaattaaaaatattcttttga 60
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 836 tttggagtttaggtaattatattttgcactgtagtggtagaatt-aaaatattcttttgg 778
Query: 61 tgatttttttggagctgccatgtacagtgaatatactctgtaattctgtggggaaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 tgatttttttggagctgccatgtacagtgaatatactctgtaattctgtggggaaagaag 718
Query: 121 ctgtctttgtattattggcaggcatgcaaaatcaatgtatacttacagaaggaaaaatga 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 717 ctgtctttgtattattggcaggcatgcaaaatcaatgtatacttatagaaggaaaaatga 658
Query: 181 tcaattcatctccttttgtaacccagtatttctccttctaagaattataccacagatata 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 657 tcaattcatctccttttgtaacgcagtatttctccttctaagaattataccacagatata 598
Query: 241 gctatacacagaggagcaaagcaagatggagcttaccactgcagatttgtatgtgtccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gctatacacagaggagcaaagcaagatggagcttaccactgcagatttgtatgtgtccac 538
Query: 301 acacatatgtgtgtgaatatactcatatgtgcatatgttgatgtgccagggggtgagcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 acacatatgtgtgtgaatatactcatatgtgcatatgttgatgtgccagggggtgagcat 478
Query: 361 gtgagtatgtgtgtgatagttatagttctattgtcagtctccaccttgtttttggagaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gtgagtatgtgtgtgatagttatagttctattgtcagtctccaccttgtttttggagaca 418
Query: 421 aggtcttttgcttaacttgggactcaccagtttggctagactgatggcccagcaagtcct 480
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 417 aggtcttttgcttaacttgggactcaccagtttggctagacggatggcccagcaagtcct 358
Query: 481 agggatctttgtgtctctgcctctccagtgctaagattacaagggcacactattgtgcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 agggatctttgtgtctctgcctctccagtgctaagattacaagggcacactattgtgcct 298
Query: 541 gtttctaatctgggtgctggggatacaagctcaggtcctcgtgcttgtgtgacaagcac 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gtttctaatctgggtgctggggatacaagctcaggtcctcgtgcttgtgtgacaagcac 239
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
