Query= MSMg01no330_h09.b1 MSMg01no330_h09.b1 CHROMAT_FILE:
MSMg01no330_h09.b1 PHD_FILE: MSMg01no330_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:10 2005
(316 letters)
>mm_chr13_56476378_56477093
Length = 716
Score = 580 bits (300), Expect = e-170
Identities = 309/312 (99%)
Strand = Plus / Plus
Query: 5 gaattcgttatacaattcagatatttttaaatattcactttaagttttggggcgttggtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 205 gaattcgttatacaattcagatatttttaaatattcactttaagttttggggcattggtt 264
Query: 65 tgttttgctttgttgcctctctgggattacggttgcatctcctcagtcactaaagccacc 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgttttgctttgttgtctctctgggattacggttgcatctcctcagtcactaaagccacc 324
Query: 125 tctcagctttctggttcctgccccttccccacagccctcgctcccatttatctcttgaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctcagctttctggttcctgccccttccccacagccctcgctcccatttatctcttgaca 384
Query: 185 ctttccattggtgtgtcttcaagttcaatcatcttttctttgacacttccttcccagtac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctttccattggtgtgtcttcaagttcaatcatcttttctttgacacttccttcccagtac 444
Query: 245 tggagggtgaacccaggccccacactcatagacgagttcgataccactgagttatattct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 445 tggagggtgaacccaggccccacactcatagacgagttcgataccactgagttatgttct 504
Query: 305 gtgccctgagct 316
||||||||||||
Sbjct: 505 gtgccctgagct 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_h09.g1 MSMg01no330_h09.g1 CHROMAT_FILE:
MSMg01no330_h09.g1 PHD_FILE: MSMg01no330_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:10 2005
(290 letters)
>mm_chr13_56641753_56642445
Length = 693
Score = 528 bits (273), Expect = e-154
Identities = 287/293 (97%), Gaps = 3/293 (1%)
Strand = Plus / Minus
Query: 1 tctgaacagtgaagttgagctcagcttgccagctaagcaacattccagaccggtgcttag 60
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 375 tctgaacagtgaagttgagctcagcttgccagctaagcaacattccggaacggtgcttag 316
Query: 61 gaggcaaagcacagttatacatggaaaccaagctgattccccagaataggga---agaat 117
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 315 gaggcaaagcacagttatacatggaaaccaagctgattccccagaatagggaaggagaat 256
Query: 118 gcccacagagcagagcaggagatctgccttcgcctgccattcacacccttttgatagaaa 177
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 255 gcccacagagcagagcaggagatctgcctttgcctgccattcacacccttttgatagaaa 196
Query: 178 tggatccaaggagctgaaggagtttacagccccataggaggaacaacagtatgaactaac 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tggatccaaggagctgaaggagtttacagccccataggaggaacaacagtatgaactaac 136
Query: 238 cagtacccacagaactcccagggactaaaccactaatcaaagagaacacaagg 290
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cagtacccacagaactcccagggactaaaccactaatcaaagagaacacaagg 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 693
Length adjustment: 9
Effective length of query: 281
Effective length of database: 684
Effective search space: 192204
Effective search space used: 192204
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
