TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCACAGAGAGATCAACACAGTCAAGTCACATGGACACTTCTGTGAATATA
CAAAACCTCCCTAATGTAATAACAATGTAAACAGATAATCTTTTAGAGTT
TTAAATTCAAATGAATTTTTTCTTAAAATTTTAAATATCTACAGAGAAGT
GACAAAAACCATTAAATCCAGTATTTCCATTGAGATGATGCTCCATCCCA
GAGGATGATATTTGTTCTTTCTTAGCACACATCATTTCTTAGCTGTCATC
ATTTTCATAACATTTGGGATATAAGTTACTATTTCATAATTGGTAATAGT
TTAAAAACTCTGTCATATTACAGAAAGAAATAATGCAGTTTTACAAGTTT
ATTAAGGACTTTTCTTTGATTAAATATTTATTTCAATATGAAATTACAAA
TATTGATATCATATTAATATAAGGACAACACATGAAAAAATTACTTTAAG
TGAGAAGAATAGTATATGGATGTATTAGTGTAGACCTCAAAATAGTTTTA
GGAAATGCTCAATATATATTTTTTAACTGTTTGGACATTTTCGTTTATGA
ATATATGTGAATATGTATTTATTTTTTCTTTTAGTAGACATTTCTTTATT
TACATTATAAATGTTATGTCCTTTCCTAGTTTCCCCTCTGAAAATTTTCT
ACCCCCTCCCCTCTTCCCCTGCTCTCCAACCCACCCATTCCCACTT

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTTTGTAGACCAGGCTGGCCTCAA
ACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCAT
GCACCACCAAGGCCCAGTGAATCAATTGTTTTAAAGATGGTATAAAGTCT
GCAGGAGACTCATATTCTGTCTAATGTGGGCTCCATGGGAATTTTGGGTT
TAAATCCTGACATGACAAATTAGAAAGGTGTAAATAGGCTAAAATGTGGG
TGATTTTGAGTATTGTGTTTGCTTTATTGTTCCTCTGGGAAAAGGGCAAG
CTACAGGTTTTCCTGTTTACCAGCTGAAGGCTATGCTGATTTGGGGAAAA
GATTTTGTCTTTGTGTTTTTGGAGAAGGTGATTAAGGTATTTACACTTTC
CTGAGTTATATGGATCAGATTTGATAGAGGGAGATCCCTGAGAACTAGAT
TTCAGAGAATCATACGAAAAGTTTATCTTCATGATACTAAGATTTTGTTT
TGAGATTTATATGTTACAGAATATACAGCTTTGGTGAATGTCATCGTCAG
ACATGCTGAACTGACCTGCCTGAACTCCTGATGTCTTGGTTTTTCATCTG
GATCCAGTCAAGACACAGACATCAGAGACTAATACAATCATTAGTATGGT
TTTCTTAAGTTCAATTAACTCCCCCATTTTGCTACCC

Query= MSMg01no330_n18.b1 MSMg01no330_n18.b1 CHROMAT_FILE:
MSMg01no330_n18.b1 PHD_FILE: MSMg01no330_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:40 2005
         (705 letters)



>mm_chr13_87431668_87432771
          Length = 1104

 Score = 1280 bits (662), Expect = 0.0
 Identities = 692/702 (98%), Gaps = 1/702 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccacagagagatcaacacagtcaagtcacatggacacttctgtgaatatacaaa 63
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 779 ggaattccacagagagatcaacacagtcaagtcacttggacacttctgtgaatatacaaa 720

                                                                       
Query: 64  acctccctaatgtaataacaatgtaaacagataatcttttagagttttaaattcaaatga 123
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 719 acctccctaatgtaataacaatgtaaacagataaccttttagagttttaaattcaaatga 660

                                                                       
Query: 124 attttttcttaaaattttaaatatctacagagaagtgacaaaaaccattaaatccagtat 183
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 659 attttttcttaaaattttaaatatctacagagaagtgacaaaaactattaaatccagtat 600

                                                                       
Query: 184 ttccattgagatgatgctccatcccagaggatgatatttgttctttcttagcacacatca 243
           |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 599 ttccattgagatgatgctccatcccagagggtgat-tttgttctttcttagcacacatca 541

                                                                       
Query: 244 tttcttagctgtcatcattttcataacatttgggatataagttactatttcataattggt 303
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 540 tttcttagctgtcatcattttcataatatttgggatataagttactatttcataattggt 481

                                                                       
Query: 304 aatagtttaaaaactctgtcatattacagaaagaaataatgcagttttacaagtttatta 363
           ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 480 aatagtttaaaaactctgtcataatagagaaagaaataatgcagttttacaagtttatta 421

                                                                       
Query: 364 aggacttttctttgattaaatatttatttcaatatgaaattacaaatattgatatcatat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aggacttttctttgattaaatatttatttcaatatgaaattacaaatattgatatcatat 361

                                                                       
Query: 424 taatataaggacaacacatgaaaaaattactttaagtgagaagaatagtatatggatgta 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 taatataaggacaacacatgaaaaaattactttaagtgagaagaatagtatatggatgta 301

                                                                       
Query: 484 ttagtgtagacctcaaaatagttttaggaaatgctcaatatatattttttaactgtttgg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttagtgtagacctcaaaatagttttaggaaatgctcaatatatattttttaactgtttgg 241

                                                                       
Query: 544 acattttcgtttatgaatatatgtgaatatgtatttattttttcttttagtagacatttc 603
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 acattttcatttatgaatatatgtgaatatgtatttattttttcttttagtagacatttc 181

                                                                       
Query: 604 tttatttacattataaatgttatgtcctttcctagtttcccctctgaaaattttctaccc 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tttatttacattataaatgttatgtcctttcctagtttcccctctgaaaattttctaccc 121

                                                     
Query: 664 cctcccctcttcccctgctctccaacccacccattcccactt 705
           ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 120 cctcccctcttcccctgctctccaacccacccactcccactt 79


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 705
Length of database: 1104
Length adjustment: 10
Effective length of query: 695
Effective length of database: 1094
Effective search space:   760330
Effective search space used:   760330
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)