Query= MSMg01no331_i23.b1 MSMg01no331_i23.b1 CHROMAT_FILE:
MSMg01no331_i23.b1 PHD_FILE: MSMg01no331_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:28 2005
(343 letters)
>mm_chr13_111248392_111249134
Length = 743
Score = 632 bits (327), Expect = 0.0
Identities = 339/343 (98%)
Strand = Plus / Plus
Query: 1 tgaccttttctccttccagaagattctcaagatcaaatcactcacaaatgacatggctat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tgaccttttctccttccagaagattctcaagatcaaatcactcacaaatggcatggctat 260
Query: 61 ctcctctgtgtctctaaaatcttgcccatagcaccatatctccaaatgatctctaacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcctctgtgtctctaaaatcttgcccatagcaccatatctccaaatgatctctaacttt 320
Query: 121 ctctatgtcaggtctgcaccaactttttatttactaagtagtattcatgttaggtacaca 180
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 ccctatgtcaggtctgcaccaactttttatttactaagtagtactcatgttaggtacaca 380
Query: 181 gctcacagggcatgagataaggatttgtggaatagaagcgaaacttccccacttcaatta 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctcacagggcatgagataagggtttgtggaatagaagcgaaacttccccacttcaatta 440
Query: 241 ataaaagagaaaagcaagattagacggtacactctgattaaaaagttcggaatttttgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaaagagaaaagcaagattagacggtacactctgattaaaaagttcggaatttttgga 500
Query: 301 gaaacagacaggctgtttcaggggtatcattagttgtgtgctc 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaacagacaggctgtttcaggggtatcattagttgtgtgctc 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_i23.g1 MSMg01no331_i23.g1 CHROMAT_FILE:
MSMg01no331_i23.g1 PHD_FILE: MSMg01no331_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:28 2005
(585 letters)
>mm_chr13_111383389_111384376
Length = 988
Score = 1033 bits (534), Expect = 0.0
Identities = 572/586 (97%), Gaps = 3/586 (0%)
Strand = Plus / Minus
Query: 3 aaagggggaggggtcatctgatcaaggtgagcagagaatcaaaagtattagcttaccaga 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 aaagggggaggggtcatctgatcaaggtgagcagagaatcaaaagtattagcttaccaga 729
Query: 63 cagttctgctttccttgctcagac---taatggtcagatggggctcaaccacagaagccc 119
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 728 aagttctgctttccttgctcagactaataatgatcagatggggctcaaccacagaagccc 669
Query: 120 tgccagagaaaggaaaccatcagcgcattagtgctggggctaccgtgagaaaccgaaaac 179
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 668 tgccagagaaaggaaaccatcagtgcattagtgctggggctaccatgagaaaccgaaaac 609
Query: 180 ttaaaaacactccagagctgtcatctccattggacattttctgacttctgatactgtagg 239
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 608 ttaaaaacactccagagctgtcatctctattggacattttctgacttctgatactgtaag 549
Query: 240 aaggagcaggggaactgggaagaaaccttacaaggctaaactaaactcctggaaggcagt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aaggagcaggggaactgggaagaaaccttacaaggctaaactaaactcctggaaggcagt 489
Query: 300 catgcttagaaagttaaggccaattttctccaggcatttgataaatattaaacccatgta 359
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 488 catgcttagaaagttaaggccaattttctccaggcatttgataaatattaaatccatgta 429
Query: 360 tggcatgagttaaggaaagcatcattggggggtcatgagtaagatgtgtatcatctttca 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gggcatgagttaaggaaagcatcattggggggtcatgagtaagatgtgtatcatctttca 369
Query: 420 atgctaatgagacagagggttgccatattttcacttcaacgctcaaatgtgacacacctt 479
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 368 atgctaatgagacagagggttgccgtattttcacttcaacgctcaaatgtgacacacctt 309
Query: 480 cagaacaagggttaattgaaattatataaaaaagaatcttcttcttaggtgaacgatgcc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 308 cagaacaagggttaattgaaattatataaaaaagaatcttcttcttaggtgaaagatacc 249
Query: 540 cttttctggagtagcagttatgtacgtgcctgcataaaatacaagg 585
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cttttctggagtagcagttatgtacgtgcctgcataaaatacaagg 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 988
Length adjustment: 10
Effective length of query: 575
Effective length of database: 978
Effective search space: 562350
Effective search space used: 562350
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
