NNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCAGAGAGAATACTGAGGTTAAGAGTGCTTTCTGTTCTTCCAGGA
CACCCGAGTTCAGTTCTTAGTAACCCACACCAGGCAATTGGCCATTGCTT
ATAACAGCAGGTCCAACACCTTCTGTCTTCTGAGGGCTCTCACTCACATA
GTATATACCTGCATCCAGGCACACACATTCACATAAATAAAAATAAACCT
TTTTTGTCATTGTTAAGATGAGCTTGGACATGAACAATGTAAGGAGGTCT
CTTTCCATAAGGACAGAAATGCTACAAAAGGGTTTTGATGGTAGCAGTTT
CTAGTATCAGGTCCTAGGGGAACCAAATGCTGAGATGCGGTTGTAGCAGG
ATTTAGCTGGGGATGCTCCATGTACTGCTGTGGAATATTCCAGGCAACAA
AGCTTTAGTCCACTTCTGCTGAATTCTTGTGAATTATCCATGAGCTACTT
ACTGTCTGTCTTAGTTAGGGTTTTACTGCTGTGAACAGACACCATGACTA
AAGCAACTTTTATAAGGACAACATTTAACTGGGCTGGCTTACAGGATCAG
AGGTTCAGTCCATTATCGTCAAGGCAGGAACATGGCAGTGTCTAGGCAGG
CATGGTGCAGGAGGAGCTGAGAGTTCTACATCTTTATCTGAAGGCCCCTA
GGAGAAGACTGGCTTCCAGGCAGCTAGGACAGAGAATTAAAGTCCACGCC
CACAGTGA

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTAGAAAGTCTTTACTTTATTTATTTAT
TCCATAACCAAGTTATCACTGACTGGAGAATTGTTCAGTTTCTATAGTAT
TTGGAGTTTCTCTTGTTTCTGTTGTTGAAGTCTGATCTGATAGTATACAA
GAGGTTATTTCAATCTTCTTGTATCTGTTGAGGCTTGCTTTGTGCCTGAT
TATATGGTTAATTTTGGAGAAAATTCTGAGGTGCTGAGAAGAAGGTATAT
TCTTTTGTTTTCGGATGAAAGGTTCTGATAAATCCATTTGGTTTATAACA
TCCATGAGTTTCATTGTCTCTCTGTTTATTTTCTGTTTTGATGATCTGTC
CATTGGTAAGGGTGCAGTATTGAAGTATTGGGCTCAATTTGTGATTATAC
TTTAGTAAAATCTTTGATCAGTGTGGGTGCCCTTGCATTTGGGGCAAAGA
TGTTCAGAACTGAGAAGTCCTCTTGGTGGATTTTTCCTTTTATGTGTATG
AAGTGTGCTTCTCCATCTCTTTTTATAACTTTTGATTGAAAGTTTCTTTT
ACTAAATATTATAATAGCTACTCCAGATTGTTTCTTGGGTCTGTTTGCTT
GGAATTTTTTTTCTAGCCCTTTACTCTGAGGTAGCGTATTCTGAAGTGTG
TTTTTTCTATATTGCATATTGATGGCACCTGTTTATCCCTGTGTTTTA

Query= MSMg01no335_a20.b1 MSMg01no335_a20.b1 CHROMAT_FILE:
MSMg01no335_a20.b1 PHD_FILE: MSMg01no335_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:41 2005
         (616 letters)



>mm_chr13_74909653_74910668
          Length = 1016

 Score = 1160 bits (600), Expect = 0.0
 Identities = 609/612 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagagagaatactgaggttaagagtgctttctgttcttccaggacacccgagttc 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagagagaagactgaggttaagagtgctttctgttcttccaggacacccgagttc 264

                                                                       
Query: 65  agttcttagtaacccacaccaggcaattggccattgcttataacagcaggtccaacacct 124
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agttcctagtaacccacaccaggcaattggccattgcttataacagcaggtccaacacct 324

                                                                       
Query: 125 tctgtcttctgagggctctcactcacatagtatatacctgcatccaggcacacacattca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgtcttctgagggctctcactcacatagtatatacctgcatccaggcacacacattca 384

                                                                       
Query: 185 cataaataaaaataaaccttttttgtcattgttaagatgagcttggacatgaacaatgta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cataaataaaaataaaccttttttgtcattgttaagatgagcttggacatgaacaatgta 444

                                                                       
Query: 245 aggaggtctctttccataaggacagaaatgctacaaaagggttttgatggtagcagtttc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aggaggtctctttccataaggacagaaatgctacaaaagggttttgatggtagcagtttc 504

                                                                       
Query: 305 tagtatcaggtcctaggggaaccaaatgctgagatgcggttgtagcaggatttagctggg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagtatcaggtcctaggggaaccaaatgctgagatgcggttgtagcaggatttagctggg 564

                                                                       
Query: 365 gatgctccatgtactgctgtggaatattccaggcaacaaagctttagtccacttctgctg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gatgctccatgtactgctgtggaatattccaggcaacaaagctttagtccacttctgctg 624

                                                                       
Query: 425 aattcttgtgaattatccatgagctacttactgtctgtcttagttagggttttactgctg 484
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 625 aattcttgtgaattatccatgagttacttactgtctgtcttagttagggttttactgctg 684

                                                                       
Query: 485 tgaacagacaccatgactaaagcaacttttataaggacaacatttaactgggctggctta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgaacagacaccatgactaaagcaacttttataaggacaacatttaactgggctggctta 744

                                                                       
Query: 545 caggatcagaggttcagtccattatcgtcaaggcaggaacatggcagtgtctaggcaggc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caggatcagaggttcagtccattatcgtcaaggcaggaacatggcagtgtctaggcaggc 804

                       
Query: 605 atggtgcaggag 616
           ||||||||||||
Sbjct: 805 atggtgcaggag 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)