CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACTCCTCCTCTGTCTCCCTTCTGAAAAGTTGTGCCTTCAAGAGACA
ACAACCAAACACTATAAAACAAAATAAAATAAGACAAGGCAAAAAGCCCT
TGCACACAGGCTAGGGGAGGCAACCCAATAGGAGCAAAAGTCCCAAGAGC
AGATGCATGAGTCAAAGACACACCCACTCCCAGTTAGGAGTACCACAAAA
CCACCAAGCTATTATCAGCTATATACACATAGAGGACCTGGTACAGTCCC
CTGCATGCACCATACTTGCGGCTTCTGTCTCTCTGAACCAATATGTGCTG
TGTTGGTGGCCAGGATTCTTTTTCAGTAGGATGCAGAGAATAGAATGTAA
GGTTGAAGGCTCCATTCAGGCCCTATCTTGACCTCTCCATATTCAGTGAG
CAGTATCATCCTCACAATGGGGCCCAACTGTCAATTTTCAGAGAGCAACC
GTCTGCCCAAGCATCAGTCCTGATTGTTTGGGGATCTCCGCAGGAGCCCC
TCGGCCAACAACTTAATAGAATATGACACAGTCTTGCCACAATGAGCGTT
GCTTGGCTACAAAAGATTGCCAGTTCAAACTTCATATCCCCCATTACTGG
AAGTCATCACTAGGATCACCCTCATACATTCCAAGAAATTTGCACTGCAC
TATAGCTTCCCACCATCCCCTCAAATGCTCCCCTGCCTCAATTTCACCCA
TN

AATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACTTAAGGAGTCAGAACTTCAGAAGTG
GTCATTGCTGCAGTTCTCTCCTGTGCATAGTGAACCATAAAGGCTTTTGC
CAAATGAAGTTCATCACATGCCAAGAATGCAGCAGGCCCTAGCCCTCACC
CTAGCCCTAAGCTGGGGCTTCAGAACCTGAATAGACCAATTCCAAAGAAA
CATTGTCTTCTAACTTTTCATCCTTCTAAATTCCTCTTAACACAACCTTC
ACTAGCTTAGTCCAGGTAGCCACTGTCCTTTCATTTCCTCTCAGATTTTT
TTTATGTTCTGTAATATTTAAAGGCATCACACTCTACGTAATTCTTCAGA
CCACCCACTTAGAAAGGTTTCCCCCATATACATTCAAAAAGAATAATACT
CATCTATTTCCTTTTCTTCGCCAGCTCTTGTAATGAATTGGGTTCACATA
TCCAGCTAGTGAGCCACACAGAGAACTCGGTGACAGAGAGGGTCTCTCTG
CTCTATAACTCTATCTCATGTGTGAAGAGGAGAGCGTTACCAGAGACCTT
CATTGGCTGTGCCTTGCTATTTCTCCAGGGGGCACAGCAAAAGCTAANGG
TAGAAACCATCCGTAAACAAAATCTAAGACAGTGGGACTCAACCCATCTC
CTGCTGTGGTCCTTTTTAAACAAGTCTCCATGGTGTGGGGGGCCCCGAAC
CCCAAT

Query= MSMg01no337_f06.g1 MSMg01no337_f06.g1 CHROMAT_FILE:
MSMg01no337_f06.g1 PHD_FILE: MSMg01no337_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:40 2005
         (499 letters)



>mm_chr13_39634328_39635225
          Length = 898

 Score =  934 bits (483), Expect = 0.0
 Identities = 495/499 (99%), Gaps = 1/499 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acttaaggagtcagaacttcagaagtggtcattgctgcagttctctcctgtgcatagtga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 698 acttaaggagtcagaacttcagaagtggtcattgctgcagttctctcctgtacatagtga 639

                                                                       
Query: 61  accataaaggcttttgccaaatgaagttcatcacatgccaagaatgcagcaggccctagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 accataaaggcttttgccaaatgaagttcatcacatgccaagaatgcagcaggccctagc 579

                                                                       
Query: 121 cctcaccctagccctaagctggggcttcagaacctgaatagaccaattccaaagaaacat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 cctcaccctagccctaagctggggcttcagaacctgaatagaccaattccaaagaaacat 519

                                                                       
Query: 181 tgtcttctaacttttcatccttctaaattcctcttaacacaaccttcactagcttagtcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tgtcttctaacttttcatccttctaaattcctcttaacacaaccttcactagcttagtcc 459

                                                                       
Query: 241 aggtagccactgtcctttcatttcctctcagattttttttatgttctgtaatatttaaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aggtagccactgtcctttcatttcctctcagattttttttatgttctgtaatatttaaag 399

                                                                       
Query: 301 gcatcacactctacgtaattcttcagaccacccacttagaaaggtttcccccatatacat 360
           ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 398 gcatcacactctacgtaattcttcagaccacccccttagaaaggtt-cccccatatacat 340

                                                                       
Query: 361 tcaaaaagaataatactcatctatttccttttcttcgccagctcttgtaatgaattgggt 420
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 339 tcaaaaagaataatactcatctatttccttttcttcaccagctcttgtaatgaattgggt 280

                                                                       
Query: 421 tcacatatccagctagtgagccacacagagaactcggtgacagagagggtctctctgctc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tcacatatccagctagtgagccacacagagaactcggtgacagagagggtctctctgctc 220

                              
Query: 481 tataactctatctcatgtg 499
           |||||||||||||||||||
Sbjct: 219 tataactctatctcatgtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 898
Length adjustment: 10
Effective length of query: 489
Effective length of database: 888
Effective search space:   434232
Effective search space used:   434232
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)