Query= MSMg01no337_j02.b1 MSMg01no337_j02.b1 CHROMAT_FILE:
MSMg01no337_j02.b1 PHD_FILE: MSMg01no337_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:59 2005
(623 letters)
>mm_chr13_70544810_70545832
Length = 1023
Score = 1007 bits (521), Expect = 0.0
Identities = 563/579 (97%), Gaps = 5/579 (0%)
Strand = Plus / Minus
Query: 47 cagtctacataaaattttaggacattgtcagaatgcag--acagtctttctctgaatata 104
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1023 cagtctacataaaatttcaggacattgtcagaatgcagacacagtctttctctgaatata 964
Query: 105 atatgactgacctataatccacttcccacctgaaacctcatgaaaatcactgcttttctg 164
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 acatgactgacctataatctacttcccacctgaaacctcatgaaaatcactgcttttctg 904
Query: 165 catctctgtgaatattccacgttttttttttgaacccccaagaggatagtctcagattac 224
|||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||
Sbjct: 903 catctctgtgaatattccac---ttttttttgaactcccaagagtatagtctcagattat 847
Query: 225 agtgctctctggcatttctacccaatgtccctccaccaaaaaagttacagaaccttgaga 284
||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 846 agtgctctctggcatttcttcccaatgcccctccaccaaaaaatttacagaaccttgaga 787
Query: 285 gctatgggttcaagtttagccatggtaacaactccacttctctactacaagtttttgtat 344
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 actatgggttcaagtttagccatggtaacaactccacttctctactacaagtttttgtat 727
Query: 345 tagtcacggaagtcttgctgagaccaaagtatctaaatcaaacagtggctcatggattta 404
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 726 tagtcacggaagtcttgctgagaccaaagtatctaaatcaaacagtggctcgtggattta 667
Query: 405 gaggcatctcagtccatcatgcagagaaagtacaatggagtggttacatccaaggagcaa 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gaggcatctcagtccatcatgcagagaaagtacaatggagtggttacatccaaggagcaa 607
Query: 465 gagcctgttataggtgggcatttacatcgtctatatcttcgtaggtcaggtaacagtggg 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gagcctgttataggtgggcatttacatcgtctatatcttcgtaggtcaggtaacagtggg 547
Query: 525 cagaacagggatcaagcaagacgcaacagtcagtttaatcctacttcctaaatgtaccac 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 cagaacagggatcaagcaagacgcaacagtcagtttaatcctacttcctaaatgtaccac 487
Query: 585 aagcttgaaaaaaatgtaagctagaaacaaacatctttg 623
|||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aagcttgaaaaaaatgtaagctagaaacaaacatctttg 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_j02.g1 MSMg01no337_j02.g1 CHROMAT_FILE:
MSMg01no337_j02.g1 PHD_FILE: MSMg01no337_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:59 2005
(528 letters)
>mm_chr13_70388061_70388988
Length = 928
Score = 982 bits (508), Expect = 0.0
Identities = 523/528 (99%)
Strand = Plus / Plus
Query: 1 agcctttgtgtcttgacagtgaccttaaaaggtcaagtgatggcacaatcagggttaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcctttgtgtcttgacagtgaccttaaaaggtcaagtgatggcacaatcagggttaacc 260
Query: 61 aactgaaataactggataactttgttccttatttcattttaactaagctattgtctctcc 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 aactgaaataactggataactttgtttcttatttcattttaactaagctattgtctctcc 320
Query: 121 tttcttgataagccaatattccagcagctaaaggggctcagccttcttgtcttttgagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttcttgataagccaatattccagcagctaaaggggctcagccttcttgtcttttgagtg 380
Query: 181 gagctagaggatgaagagtgctaatttttaagagagaattggacactgaaatgaatttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagctagaggatgaagagtgctaatttttaagagagaattggacactgaaatgaatttgt 440
Query: 241 gtttggtgtagtcttttctagggcaaagaaagaaaacatcttggaatgcctgcatgtaat 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttagtgtagtcttttctagggcaaagaaagaaaacatcttggaatgcctgcatgtaat 500
Query: 301 agaaacggccctggaagtgatcagtgcacgtgttaagtaagggattgtcagtattctttc 360
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 agaaatggccctggaagtgatcagtgcacatgttaagtaagggattgtcagtattctttc 560
Query: 361 tcttgtatctgcctcttggtcttcaagttacagcctgaagagtttgcaaaccaatgccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttgtatctgcctcttggtcttcaagttacagcctgaagagtttgcaaaccaatgccct 620
Query: 421 caaggctacattcattcagtgtcctgtgcaggacacattttcttgatcatggactctaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaggctacattcattcagtgtcctgtgcaggacacattttcttgatcatggactctaca 680
Query: 481 agagccagagctacctctctgctcagactgcctgcacccatctaagat 528
|||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 681 agagccagagctacctctctgctcagactgtctgcacccatctaagat 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
