Query= MSMg01no337_p02.b1 MSMg01no337_p02.b1 CHROMAT_FILE:
MSMg01no337_p02.b1 PHD_FILE: MSMg01no337_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:28 2005
(487 letters)
>mm_chr13_4027632_4028518
Length = 887
Score = 888 bits (459), Expect = 0.0
Identities = 480/487 (98%)
Strand = Plus / Plus
Query: 1 attagttctagctgttttactatttagtgtgctgagaaacccatttcaacatcctggctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attagttctagctgttttactatttagtgtgctgagaaacccatttcaacatcctggctt 260
Query: 61 ggtaacaattgtgataatcaatattaacaatgaagcatttatagtgctcaagatgactga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtaacaattgtgataatcaatattaacaatgaagcatttatagtgctcaagatgactga 320
Query: 121 catgcataaaggatgctggacataattttaatttttccattctcataatgactataatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgcataaaggatgctggacataattttaatttttccattctcataatgactataatga 380
Query: 181 aatcgattttgtttctacagcattataatcctaatggagacttatactgtggagtttaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtcgattttgtttctacagcattataatcctaatggagacttatactgtggagtttaac 440
Query: 241 agcatttcatttatacttttcatctgtaaactgtgagttttagaagggatgacctgctct 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 agcatttcatttagacttttcatctgtaaactgtgagttttagaagggatgaccttctct 500
Query: 301 tcttttcaacatttgaggtttataacaaggtctattttgactttctataatccgtttgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttttcaacatttgaggtttataacaaggtctattttgactttctataatccgtttgtc 560
Query: 361 ttgccctgaaggacaatagagggaaattatctatgaggtttatattgggcatccagctag 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 561 ttgccctgaaggacaatagagggaaattatctatgaggtttatattgggcatccagttag 620
Query: 421 ttgattgtttgccattagctaagtcagggtcttcaaaactatgcagacctaattgctaga 480
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgattgtttgccattggctaagtcggggtcttcaaaactatgcagacctaattgctaga 680
Query: 481 acccgta 487
|||||||
Sbjct: 681 acccgta 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_p02.g1 MSMg01no337_p02.g1 CHROMAT_FILE:
MSMg01no337_p02.g1 PHD_FILE: MSMg01no337_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:28 2005
(486 letters)
>mm_chr13_4272835_4273725
Length = 891
Score = 406 bits (210), Expect = e-117
Identities = 423/506 (83%), Gaps = 37/506 (7%)
Strand = Plus / Plus
Query: 5 agctgcctgtggttaaagttggacaccccaatggacttgaccaatcctgcatccttacac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 agctgcctgtggttaaagttggacaccccaatggacttgaccaatcctgcatccttacac 254
Query: 65 tcctccaacctctggtaatgagaaacaggcaataaaaggtcatacttaaaagagactaca 124
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 255 tcctccaacctctggtaatgagaaacaggcaataaaaggtcatacttaaaagcgactaca 314
Query: 125 tggatataaacataatatggatcaattacagaaaaaattgtcc-agag-tagacatattg 182
|||||||| | || |||| | || |||||| ||||||| ||| |||| || ||||||||
Sbjct: 315 tggatatagag-ta-tatgtaccagttacaggaaaaatt-tcccagagctaaacatattg 371
Query: 183 ttca--gggctagagcacttgccagtgtatacaagac--tacaaattgact---g----t 231
|||| || || | ||||||||||||| | || ||| ||| ||||| | |
Sbjct: 372 ttcactgg--taaaacacttgccagtgtgtgcaggaccctacg--ttgaccacaggcact 427
Query: 232 a--ggatgggtta--atctct---caggtggtcactggatttaaatccaaacaagtcaag 284
| || |||| | || | | || ||| || || ||||||||||||| ||||||||
Sbjct: 428 aaagg-tggg--aggatttttgcccacgtgaccagtgaatttaaatccaaagaagtcaag 484
Query: 285 ataggaacgacaataaagcagaagac--tggccaaagaggaatttctgtaacatcagtaa 342
||| || || || ||||||||||| |||||| ||||||||||||||||||||| ||
Sbjct: 485 ataaaaatgataacaaagcagaagaaattggccagagaggaatttctgtaacatcactag 544
Query: 343 aaaatcaaggatattactacataaggtagcaaaatacccatatgactcatgtcctgggcc 402
||||||||||||||||||||||||||| ||||||||||||| || | | ||||||| |||
Sbjct: 545 aaaatcaaggatattactacataaggtggcaaaatacccatgtgccccctgtcctgtgcc 604
Query: 403 attcgtcat----ccctcttacattttagtgatatatccctccccttccactccagcaaa 458
||| |||| ||| |||| |||||||| || | ||||||||||||||||||||||||
Sbjct: 605 cttcttcatttcacccccttatattttagtaatgtttccctccccttccactccagcaaa 664
Query: 459 tatctatgagtaaaaatgaatttcta 484
||||||||||||||| ||| ||||||
Sbjct: 665 tatctatgagtaaaa-tgagtttcta 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 891
Length adjustment: 10
Effective length of query: 476
Effective length of database: 881
Effective search space: 419356
Effective search space used: 419356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
