ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCATGATTTTCTTAGGCAAATGGATGGAACTAGAAAATATCATCCTGAGT
GAGGTAGCATCATCACAAAAGAACACATATGGTATGCACTCATTGATCAG
TTACTTTTAATGTTTGGTGATTAAACTGTGCTATTAATGCATTTATCCAT
CAAAATTAGAATTTGAATAATGGTCCAAATTATAGTGCTTTCTATTTTAA
AGAATACATATGCTTATGGATATCCTTATAATTGGGCACTAGGCTATATC
TTGCTAATGTTTTTTAATTAACTATTAAGACAGTCTTGTTTTTAGGAATA
GAGGGGATTGCAGAAAAAGGGTGTTTGGACTCCCAATCCTCAAACTCAAC
AATTGAGTTTTAACTATTACAGCCACAGTCTCTGAAAAATACCTATTAGT
GCTAGTGTAGTCAAACATTTAATGAAGGTATCACCTGCCTTCAAAGAGAA
TGAACTTTTTTTGACACTGCTACCAAGTTGATAATATCCCTTGAGATCGT
TTAAGATTGAACTTAACCTGCTGTCCTACTGTGTACTTAGCCTACTTAAG
ATTAACTTGCCTTTAGGAGAACAATGTAACCAACTTTACTTGCCTTGGAC
TTTTCTATGTAATCAGAATTTACAATCTAAACTAGTGTGTAATAGAAAGT
TACATACTCTGCTGTGTGCTTGACAGAGA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCTATTTAGGTCTGTACTCTATTTTTAAATAGGGC
TATTTGGTCCTCAGGAGTCTACCTTCTTGGATTCTTCGTATATTTTGGAT
ATTAGCCCTCTATCGGATGAATGGTTTGTAAATATCTTTTCTCAATCTGT
GGGTTTCCAGTTTGTCCTATTGATAGGGCCCTTTGCTTTTCAATTTTCTG
AGGTCCCAAATGTCAATTGTTGCTCTTAAAGTATAGGCCATTACTATTTT
GTTCAGGAAGTTTTCTCCTGTGCCCAAGTATTTGAGGCTCTTCTCCACTT
TTTCTTCTATTAGATTCAGAGTATCTGGTTTTATGGGGAGGTCCTTGATC
CACTTGGACTTGACCTTTATACAAAAAGATCGAAATGGATCAATTTGTAT
TTTTCTACATGCTGACTGCTGAAGCAGCACCATTTGTTGAAAATGCTGAC
ATTTTCCCACTGAATGGTTTTAGCTCCTTTATCAAAGATCAAGTGACCAT
AGGTGTGTGGTTTCGTTTCTGGGTCTTCAATTCTATTCCATTGATCTACT
TGCCTGGCTTCATACCATGAAGTTTTGTGACTATTGTTCTATAGTATATC
TTGAGGTCTGGGATGTTGATTCTCAAGAAAGATTTTTATTGGTGAGAATA
ATTTTCACTATTCTAGGTTTTTTGGATATTCCAAATGAATTTGA

Query= MSMg01no338_o08.b1 MSMg01no338_o08.b1 CHROMAT_FILE:
MSMg01no338_o08.b1 PHD_FILE: MSMg01no338_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:37 2005
         (659 letters)



>mm_chr13_19084259_19085317
          Length = 1059

 Score = 1228 bits (635), Expect = 0.0
 Identities = 653/659 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcaaatggatggaactagaaaatatcatcctgagtgaggtagcatcatcacaaaagaaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 gcaaatggatggaactagaaaatatcatcctgagtgaggtagcatcatcacaatagaaca 260

                                                                       
Query: 61  catatggtatgcactcattgatcagttacttttaatgtttggtgattaaactgtgctatt 120
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catatggtatgtactcattgatcagttacttttaatgtttggtgattaaactgtgctatt 320

                                                                       
Query: 121 aatgcatttatccatcaaaattagaatttgaataatggtccaaattatagtgctttctat 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgcatttatccatcaaaactagaatttgaataatggtccaaattatagtgctttctat 380

                                                                       
Query: 181 tttaaagaatacatatgcttatggatatccttataattgggcactaggctatatcttgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaaagaatacatatgcttatggatatccttataattgggcactaggctatatcttgct 440

                                                                       
Query: 241 aatgttttttaattaactattaagacagtcttgtttttaggaatagaggggattgcagaa 300
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatggtttttaattaactattaagacagtcttgtttttaggaatagaggggattgcagaa 500

                                                                       
Query: 301 aaagggtgtttggactcccaatcctcaaactcaacaattgagttttaactattacagcca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaagggtgtttggactcccaatcctcaaactcaacaattgagttttaactattacagcca 560

                                                                       
Query: 361 cagtctctgaaaaatacctattagtgctagtgtagtcaaacatttaatgaaggtatcacc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtctctgaaaaatacctattagtgctagtgtagtcaaacatttaatgaaggtatcacc 620

                                                                       
Query: 421 tgccttcaaagagaatgaactttttttgacactgctaccaagttgataatatcccttgag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgccttcaaagagaatgaactttttttgacactgctaccaagttgataatatcccttgag 680

                                                                       
Query: 481 atcgtttaagattgaacttaacctgctgtcctactgtgtacttagcctacttaagattaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 atcgtttaagattgaacttaacctgctgtcctactgtgtacttagcctacttaaggttaa 740

                                                                       
Query: 541 cttgcctttaggagaacaatgtaaccaactttacttgccttggacttttctatgtaatca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttgcctttaggagaacaatgtaaccaactttacttgccttggacttttctatgtaatca 800

                                                                      
Query: 601 gaatttacaatctaaactagtgtgtaatagaaagttacatactctgctgtgtgcttgac 659
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 801 gaatttacaatctaaactagtgtgtaatagaaagttacatactctgctgcgtgcttgac 859


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space:   680801
Effective search space used:   680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)