Query= MSMg01no339_h09.b1 MSMg01no339_h09.b1 CHROMAT_FILE:
MSMg01no339_h09.b1 PHD_FILE: MSMg01no339_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:18 2005
(450 letters)
>mm_chr13_82068777_82069625
Length = 849
Score = 818 bits (423), Expect = 0.0
Identities = 441/447 (98%), Gaps = 1/447 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatttgtttcgcaaacgcgtgataatctgctctggtctagtatcttgaactagg 63
|||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatttgaatgg-aaacgcgtgataatctgctctggtctagtatcttgaactagg 262
Query: 64 atgtgttcaagggtgggagacattgtgaaaggcaccactgtttttggaggtcaggtagac 123
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atgtgttcaaggatgggagacattgtgaaaggcaccactgtttttggaggtcaggtagac 322
Query: 124 ccccacttggtttctatcagctgtaagctatactaatctagacgtgatctgttggggata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccccacttggtttctatcagctgtaagctatactaatctagacgtgatctgttggggata 382
Query: 184 ggatcaagttgtcaattaagaaaagatgtcacaaatacctgaaagtaagagtgaatgaat 243
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 383 ggatcaagttgtcaattaagaaaagatgtcacaaatacctgaaagtaagagtaaatgaat 442
Query: 244 atacctttagtcccagcactcaggagggtctctgagttccaggccagcctgatctacaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atacctttagtcccagcactcaggagggtctctgagttccaggccagcctgatctacaaa 502
Query: 304 gtgagtttcagggtaaccagggatacacagagaaactctgttggaactcctcccatcccc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtgagtttcagggtaaccagggatacacagagaaactctgttggaactcctcccatcccc 562
Query: 364 accaaaaaagagtgaatcacaacctggttcattgtagattatagtggtaacagtaaagct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 accaaaaaagagtgaatcacaacctggttcattgtagattatagtggtaacagtaaagct 622
Query: 424 gttatcaggacgctgtaacacgtgcac 450
|||||||||||||||||||||||||||
Sbjct: 623 gttatcaggacgctgtaacacgtgcac 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 849
Length adjustment: 10
Effective length of query: 440
Effective length of database: 839
Effective search space: 369160
Effective search space used: 369160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_h09.g1 MSMg01no339_h09.g1 CHROMAT_FILE:
MSMg01no339_h09.g1 PHD_FILE: MSMg01no339_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:18 2005
(217 letters)
>mm_chr13_82135240_82135857
Length = 618
Score = 398 bits (206), Expect = e-115
Identities = 215/218 (98%), Gaps = 1/218 (0%)
Strand = Plus / Minus
Query: 1 caacccttacactgacttaaaggaaactgtaagtagaattggcactatgaaaataaagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 caacccttacactgacttaaaggaaactgtaagtagaattggcactatgaaaataaagta 359
Query: 61 tggcag-tttaaaaaaaaagaaacacagaaaaaagcaatcctgtttctgaatatataacg 119
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 358 tggcagttttaaaaaaaaagaaacacagaaaaaagcaatcctgtttctgaatatataatg 299
Query: 120 aaactctggaaacaggaccttagttttggtattagagtcattctggctttgtgggagttc 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aaactctggaaacgggaccttagttttggtattagagtcattctggctttgtgggagttc 239
Query: 180 agaaatactcttctgtttcctgtttgtttatttcttta 217
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 agaaatactcttctgtttcctgtttgtttatttcttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 618
Length adjustment: 9
Effective length of query: 208
Effective length of database: 609
Effective search space: 126672
Effective search space used: 126672
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
