NCCTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTACTTACCCTGTTTTACATCCTTTTCCATGAAGTTACTGTT
TCTCTTAGCCTATTAATGCTGATGTAACAGAATAACTAAAGGTCAGGAAC
CTCTGAAGAATCAATATTAATGCTTTAGAATTCCAAGGACAGTTAAGTCT
ATGACAAAATCTCTGGCTTGTTTTACAACATCATAAGGTGCTGGTTTTTC
TCTCCCAAGATGGTATATTAATTTTGTGTTTTTCAAAGGAGATAACCAGG
TTTTCTTAAGGCTAAAGATTTTATGACTGAAAACAAAAGCTATACTCCTT
TTAAAAACAAATTTTATAAACGTATTAATCTGTTCATGAGAATGGAGGAG
GTTACCCATTGTCCTCCATAGGACTTCACTCCTAGCATGGTAGTATGGTA
GCTTTGCAGAACTGAAGACTAGTTTGTCCTCCTTCCCTCTCCCCCTCTCC
TCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCATC
CCCTCCTCCTCCTCTCCTCCTCCTCCTCCTCTCTTCTTCTTCTTCTTCTT
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TCTTCTTCTTCTTCTCCTCTTTTTCCTCCTCCCTGTCTCTCTTTCTCTCT
TTTTTCATTTATTACTCTCCTATCATGGCTACA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXCTTTAAGCTTCCAATATTGAATAAAGCTTTCAAAGCCA
GTGTAATGGTTTGTACCAGGGAGTGGCACCATCTGGAGGTGTGGCCTTGT
TGGAATAGGTGTGACCTGGTTGGAATGGGTATGTCACTGTGAGTGTGGGC
ATAAGATCCTCACCTTAGTTGCCTGGAAGTCAGTCTTCCACTAGCAGCCT
TTGGATGAAGATGTAGCACTCTCTGATCTGCCTGTGCCATGCCTGCCTGG
ATACTGCCATGCTCCCACCTTGATGATAATGGACTGAACCTCTGAACCTG
TAAGCCAGCCCCAATTAAATGTTGTTTTTATAAGACTTGCCTTGGTCATG
GTGACTGTTCACAGCAGTAAAACACTAAGACAGCCAGATTAGAAGTACAG
AACCAGTCAGCCTCATGGACTCAGTTCTGTGCCTCTCCAGTGTGAGAAGA
ACCACTATTTTACAACCAAGACTATCTCGTATAAGCCATTACAATGAATC
TTCTTTTAATATATACTCATCCATTGGTTGTGTCTCCCTAGAGAACTCTA
GTAATATACTATTTAGGTGTGTAAAACTATATAGTGCAGACAGACAAATA
ATTTCATATCTATGCATATGCTTATATNAAACTTTGGATACACACATACA
CTCACCATTTAAACAAGCATATATTTTN

Query= MSMg01no339_j11.b1 MSMg01no339_j11.b1 CHROMAT_FILE:
MSMg01no339_j11.b1 PHD_FILE: MSMg01no339_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:27 2005
         (631 letters)



>mm_chr13_89651380_89652410
          Length = 1031

 Score = 1031 bits (533), Expect = 0.0
 Identities = 585/605 (96%), Gaps = 10/605 (1%)
 Strand = Plus / Minus

                                                                       
Query: 21  ctgttttacatccttttccatgaagttactgtttctcttagcctattaatgctgatgtaa 80
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ctgttttacatccttttccatgaagttactgtttctcttagcctattaatgctgatgtaa 594

                                                                       
Query: 81  cagaataactaaaggtcaggaacctctgaagaatcaatattaatgctttagaattccaag 140
           |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 593 cagaataactgaaggtcaggaacctctgaagaatcaatattaatgccttagaattccaag 534

                                                                       
Query: 141 gacagttaagtctatgacaaaatctctggcttgttttacaacatcataaggtgctggttt 200
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gacggttaagtctatgacaaaatctctggcttgttttacaacatcataaggtgctggttt 474

                                                                       
Query: 201 ttctctcccaagatggtatattaattttgtgtttttcaaaggagataaccaggttttctt 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ttctctcccaagatggtatattaattttgtgtttttcaaaggagataaccaggttttctt 414

                                                                       
Query: 261 aaggctaaagattttatgactgaaaacaaaagctatactccttttaaaaacaaattttat 320
           |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aaggctaaagatttaaagactgaaaacaaaagctatactccttttaaaaacaaattttat 354

                                                                       
Query: 321 aaacgtattaatctgttcatgagaatggaggaggttacccattgtcctccataggacttc 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aaacgtattaatctgttcatgagaatggaggaggttacccattgtcctccataggacttc 294

                                                                       
Query: 381 actcctagcatggtagtatggtagctttgcagaactgaagactagtttgtcctccttccc 440
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 actcctagcgtggtagtatggtagctttgcagaactgaagactagtttgtcctccttccc 234

                                                                       
Query: 441 tctccccctctcctcttcctcttcctcttcctcttcctcttcctcttcctcttcctcttc 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tctccccctctcctcttcctcttcctcttcctcttcctcttcctcttcctcttcctcttc 174

                                                                       
Query: 501 atcccctcctcctcctctcctcctcctcctcctc-tcttcttcttcttcttcttcttctt 559
             | | ||||| ||||||  |||||||||| ||| |||||||||||||||||||||||||
Sbjct: 173 --ctcttcctcttcctct--tcctcctcct-ctcttcttcttcttcttcttcttcttctt 119

                                                                       
Query: 560 cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct--tcttcttcttc 617
           |||||||||||||||||||||||||||||||||||||||||||||||  |||| |||  |
Sbjct: 118 cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctcctctttttc--c 61

                
Query: 618 tcctc 622
           |||||
Sbjct: 60  tcctc 56


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 124
Number of extensions: 45
Number of successful extensions: 45
Number of sequences better than 10.0: 1
Number of HSP's gapped: 39
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space:   634041
Effective search space used:   634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)