Query= MSMg01no340_i10.b1 MSMg01no340_i10.b1 CHROMAT_FILE:
MSMg01no340_i10.b1 PHD_FILE: MSMg01no340_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:33 2005
(524 letters)
>mm_chr13_60651003_60651926
Length = 924
Score = 917 bits (474), Expect = 0.0
Identities = 508/520 (97%), Gaps = 2/520 (0%)
Strand = Plus / Minus
Query: 5 gaattcttacaaactctaaccagcccttctcggagaaatttctcctctgcttgtcaatct 64
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 gaattcttacaaactcaaaccagcccttctcagagaaatttctcctctgcttgtcaatct 562
Query: 65 aaccagaacgagcaatcaaagagtttcattggatggctgtgagggtggagatcctttatg 124
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 aaccagaacgagcaatcaaagagtttcatcggatggctgtgagggtggagatcctttata 502
Query: 125 gtgggcagaatggaactgaatcttggtattggtttcctaagatcatcatcagtttaaaga 184
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgggcagaatggaaatgaatcttggtattggtttcctaagatcatcatcagtttaaaga 442
Query: 185 cggagtttaatttcatctcacagttttggtcttggaggatttagtccattcccagttaaa 244
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 cggagtttaatttcatctcacagttttggtcttggaggatttagtctgttcccagttaaa 382
Query: 245 cctttgctgtaaggcgtatgatgggtcaagttggagatagtacagggtctttaggggacg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctttgctgtaaggcgtatgatgggtcaagttggagatagtacagggtctttaggggacg 322
Query: 305 ttataaaccaaaactctaacagtctctctgctctagaatggagaagaatatttggaagat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttataaaccaaaactctaacagtctctctgctctagaatggagaagaatatttggaagat 262
Query: 365 ttgaatagaagtttctgggaatgtaccctttacaataggccctaagagtgtgaggaatct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgaatagaagtttctgggaatgtaccctttacaataggccctaagagtgtgaggaatct 202
Query: 425 ctctctctttctttctctctttctctctaacctcatttaaatggtggtgatttagttcat 484
|||| ||||||| ||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 201 ctctttctttctctctctct--ctctctaacctcatttaaatggtggtgatttagtccat 144
Query: 485 tgaataatttatgaagacacatacacatgcttgctctgaa 524
||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tgaataatttatgaagacacatacacatgcttgctctgaa 104
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_i10.g1 MSMg01no340_i10.g1 CHROMAT_FILE:
MSMg01no340_i10.g1 PHD_FILE: MSMg01no340_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:33 2005
(523 letters)
>mm_chr13_60498148_60499070
Length = 923
Score = 1004 bits (519), Expect = 0.0
Identities = 522/523 (99%)
Strand = Plus / Plus
Query: 1 atttggaaaagcgatgagccatagtagttggaagccgttactcactcccagaggctgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttggaaaagcgatgagccatagtagttggaagccgttactcactcccagaggctgagt 260
Query: 61 ttcagaagcccaacattatgtaggaatctgtgggagacatatccagagggaaggtagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcagaagcccaacattatgtaggaatctgtgggagacatatccagagggaaggtagaat 320
Query: 121 tgtgggtgctctgtctgctgttctgattggactgttgatatctagggctctctggagccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgggtgctctgtctgctgttctgattggactgttgatatctagggctctctggagccc 380
Query: 181 cagattctgtacatcagaggaaagagacctgttaagtaggttcatttcccaggaatactg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagattctgtacatcagaggaaagagacctgttaagtaggttcatttcccaggaatactg 440
Query: 241 ttgaatgttgagctacagaaagagccctttgctgagaggactatggaaggcagcaactgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgaatgttgagctacagaaagagccctttgctgagaggactatggaaggcagcaactgg 500
Query: 301 cctgcttccttcatagaagaaacaagatctggagcaaaaggattttcctaggagaaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgcttccttcatagaagaaacaagatctggagcaaaaggattttcctaggagaaaaat 560
Query: 361 gtcctaacatcctctatccactgggaaactttgtcaacacctacaacatctcgtttgata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcctaacatcctctatccactgggaaactttgtcaacacctacaacatctcgtttgata 620
Query: 421 tgtggcctccaaaattaatgacttttaagatcaactggtaagtcaagggctacctcaccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtggcctccaaaattaatgacttttaagatcaactggtaagtcaagggctacctcaccc 680
Query: 481 tacccctacccagttctactactattccctccattctacgaca 523
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tacccctacccagttctactactattccctccattctacgaca 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
