NNNCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCACTTACATGCCCAGTTATTTTGACAAAACCAACAACCCAA
TGTAGCCAAATATAGTCAATACCTGGTTGTTTGTACCCAGCCTCCTTGTG
CCCCAGATGGGTTCTTATGTGTAGATAGTCTGTGTACTCAGAATGCAGGG
TGGGCCACCAGTATCATTTTGTAAAAACATCATTTTCACCCAGACAGAGT
GGTTCTGCCCATTTACTATTGGCCACCCATATTTGAGAGTGCTCTACATG
GCTGAGTATCTGAGGGTCTCAGATTTCTCTCGTCTCTGAGAAAAATAGCT
TCATTGGAAAATGGTCAAGCTGGTGGCCATGGAGACATAGTTACCATTAA
GGTCTTTATCAATCCAAAGAGCAAAGTATGGACTACACACACACACACAC
ACACACACGCGCACACGCACACGCGCACACACAAACGCACACACACAAGC
ACACGCACACATACTCACACACACACAAATTGAAGTGAATCGACTGATTT
TGAATTGTACTTGTTTTTGTGAAATTTCCTCGTTTTTAGTTTTTTTTTAA
TTAGATTTTTTTAACTTACATTTCAAATGTTATCCCCTTTCCAATTTTCC
CCTCCGAAAATCCCCTATCCACTCCCCCTCCCCCTGCTCTCCANCCACCT
ACTCCCATTTCTGGTCCTGGCATTCCTCT

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTATATGTATATTGGATATT
AGCCCCCTCTCAGATTTAGGATTGGTAAAGATCTTTTCCCAATCTGTTAG
TTACCTTTTTGTCTTATTGACAAGTGTCCTTTGCCTTACAGAAGGTTTGC
AATTTTATGAGGTCCCATTTGTTATTCTTGATCTTACAGCACAAACCATT
GCTCTGTCTGTTCAGGAAATTTTCCCTTGTGCCCATATCTTCTGGGCTCT
TCCACACTTTCTCCTCTATAAGTTTCAGTGAATCTGGTTTTATGTGGATT
TCCTTGATCTACTTAGACTTGACCTTTGTACAGGCAATAAGAATGGATCA
ATTCACATTCTTTTACATGCTAACTGCCAGTTAAATCAGCACCATTCTTT
GAAAATCCTGTCTTCTTTCCATTGGATAATTTTAGAAACTTTGTAAAAGT
TTAAGTGAACAGAGGTGTGTGAGTTCATTTCTGGGTCTTCAATTGTATTT
CATTGATCTACCTGTCTGTTGTACCAGTACCATGCAGTTTTTATCATAAT
TGCTCTGTAGTACAGCTTGATGTACTACAAGGATGGTGATTCCACCAGAG
GTTCTTTTATTGTTGAGAATAGTTTGTGCTATCCTAGGTTTTTGTTATTC
CAGATGAATTTACAAATTGTTCTTTTCTACTG

Query= MSMg01no340_j24.b1 MSMg01no340_j24.b1 CHROMAT_FILE:
MSMg01no340_j24.b1 PHD_FILE: MSMg01no340_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:40 2005
         (654 letters)



>mm_chr13_82985048_82986101
          Length = 1054

 Score = 1199 bits (620), Expect = 0.0
 Identities = 644/653 (98%), Gaps = 3/653 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacttacatgcccagttattttgacaaaaccaacaacccaatgtagccaaatata 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttacatgcccagttattttgacaaaaccaacaacccaatgtagccaaatata 264

                                                                       
Query: 65  gtcaatacctggttgtttgtacccagcctccttgtgccccagatgggttcttatgtgtag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtcaatacctggttgtttgtacccagcctccttgtgccccagatgggttcttatgtgtag 324

                                                                       
Query: 125 atagtctgtgtactcagaatgcagggtgggccaccagtatcattttgtaaaaacatcatt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 atagtctgtgtactcagaatgcagggtgggccaccagtatcattttgtaaaaacagcatt 384

                                                                       
Query: 185 ttcacccagacagagtggttctgcccatttactattggccacccatatttgagagtgctc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcacccagacagagtggttctgcccatttactattggccacccatatttgagagtgctc 444

                                                                       
Query: 245 tacatggctgagtatctgagggtctcagatttctctcgtctctgagaaaaatagcttcat 304
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 445 tacatggctgagtatctgagggtctcagatttctctcgtctctgagaacaatagcttcat 504

                                                                       
Query: 305 tggaaaatggtcaagctggtggccatggagacatagttaccattaaggtctttatcaatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggaaaatggtcaagctggtggccatggagacatagttaccattaaggtctttatcaatc 564

                                                                       
Query: 365 caaagagcaaagtatggactacacacacacacacacacacacacgcgcacacgcacacgc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caaagagcaaagtatggactacacacacacacacacacacacacgcgcacacgcacacgc 624

                                                                       
Query: 425 gcacacacaaacgcacacacacaagcacacgcacacatactcacacacacacaaattgaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gcacacacaaacgcacacacacaagcacacgcacacatactcacacacacacaaattgaa 684

                                                                       
Query: 485 gtgaatcgactgattttgaattgtacttgtttttgtgaaatttcctcgtttttagttttt 544
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 685 gtgaatcgactgattttgaattgtacttgtttttgtgaaattttctcgtttttagttttt 744

                                                                       
Query: 545 tttt--aattagatttttttaacttacatttcaaatgttatcccctttccaattttcccc 602
           ||||  |||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 745 ttttttaattagatttttttaacttacatttcaaatgttatcccctttcctagtttcccc 804

                                                                
Query: 603 tccgaaaatcccctatccactccccctccccctgctctccancc-acctactc 654
           ||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 805 tccgaaaatcccctatccactccccctccccctgctctccaacccacctactc 857


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)