TATTCCTACGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTACGTCTGGATATCAATTATTCTGAAAGACTTCCAATCAGAGGAG
TCAAAAGTAAGATTGTCAACCACACCTTTATCATTTTCTGACCTCAAAAT
AGCTCTTGAGTTTTAGGTTGATCTTCCCCCTGGCTAGAAGCATGACTTAA
GAGGGCTATCTCAGACCTACTACTATGATTCCAAGATTGAGAGCACAAAG
CCTTTGAATGTTTCAAGGTGGAACTGGAACAAAAGGATGAACCAATTCCC
TGCTTGCATTGGTCAGACTCTGAGACCAGAGTCAACGCCAAGGGTTACAG
TGTCTCCACCAAGGGTTAGAGTGTCTCCGCTGGGTCAAGCTAGGTCCTTG
GACCTTGGGTATAGTAAATGCTTGCCAGAGCCTACTTTCTGCAGAGTCTC
TCCAGGGCCTTGTTGGATTCTGTCCATCCACACCCCACTCCCTGCTCAGG
AGTCTGGCTTTGTAACCCTTACTGGAACTCAAATTGGAAGAATATTATGT
TAGTGATGTTACGTCTTTCCAAATACAACCAGTGCAATATGGCAGCGTCC
ATCTGCGAAGACACAGTGTCCATTCTCCCAGTGGGCGGGCCCTAATTTTC
TGGATCCAAGCAAAACTGGCCTTTCCCAGCTGAAGAATATGCGCCCTGTG
TGCCCCCCTTCTTATTTTAAAGAATTCCGCGCAACATATACCCAATN

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACCAGGCATGGGGAAATGAGAAAGGGG
ACACTTGCTGTGGGCTCTGTCCTGTGACGTAGCAGCAGTGTTGGGACCAT
AATATCCGTACCTTAAACAGAGCCTTATACGTGAACAAATAAGCTTCATG
TTACAGACTTCCTAATGGCAGCTCTTACACATCTAAAATGACAGCTACAG
AAGTGCACACTCTCACGCAGAGCACGCTGAACAGAGATGCTCAAGTGCAC
CTGTGGTGTCTGCGTGAAGCTTTGGCCTTTGTTCTCCTTGAGTGTGAGTG
GACCCACCACTGCTGTGTAAAAGCAGCGAGTTTCAGAGATGAACAGTAAA
CCTTAGATCTCACTGTGAAACACAAGCAAACATTCCAGTTGTGACAGTAA
GTCTAAATGGATAAATTATTCTTATTAAAGGCTACTGTGGTGGGACCTTT
AATCCCATTTCTTGGGAGACATGGGAAGAAAGCAAATCTCTGAGTTTGAT
GCCAGCCAGTTCTACATACGGAGTTTGGGGCCAGCTAAACCTGTACATAA
TCCTAAATAAAGGGGAAAACCATACCTTCTAAAACTCCTACCCTGGGGGA
AATGAAACTTACAAAACACGTCCCCCCCGGTTATTCCTATAAACCGCCCG
ATCATTTTTTTTCTCTTCTTCCACTTGCGTCGTGCCCCCCTTTACCTTTC
CTTTCTCCATTTCCC

Query= MSMg01no341_h09.b1 MSMg01no341_h09.b1 CHROMAT_FILE:
MSMg01no341_h09.b1 PHD_FILE: MSMg01no341_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:43 2005
         (509 letters)



>mm_chr13_59477367_59478275
          Length = 909

 Score =  940 bits (486), Expect = 0.0
 Identities = 501/506 (99%), Gaps = 2/506 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttacgt-ctggatatcaattattctgaaagacttccaatcagaggagtcaaaag 63
           |||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattcttac-tcctggatatcaattattctgaaagacttccaatcataggagtcaaaag 263

                                                                       
Query: 64  taagattgtcaaccacacctttatcattttctgacctcaaaatagctcttgagttttagg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taagattgtcaaccacacctttatcattttctgacctcaaaatagctcttgagttttagg 323

                                                                       
Query: 124 ttgatcttccccctggctagaagcatgacttaagagggctatctcagacctactactatg 183
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 324 ttgatcttccccctggctagaagcatgacttaagagggctatctcaaacctactgctatg 383

                                                                       
Query: 184 attccaagattgagagcacaaagcctttgaatgtttcaaggtggaactggaacaaaagga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attccaagattgagagcacaaagcctttgaatgtttcaaggtggaactggaacaaaagga 443

                                                                       
Query: 244 tgaaccaattccctgcttgcattggtcagactctgagaccagagtcaacgccaagggtta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgaaccaattccctgcttgcattggtcagactctgagaccagagtcaacgccaagggtta 503

                                                                       
Query: 304 cagtgtctccaccaagggttagagtgtctccgctgggtcaagctaggtccttggaccttg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cagtgtctccaccaagggttagagtgtctccgctgggtcaagctaggtccttggaccttg 563

                                                                       
Query: 364 ggtatagtaaatgcttgccagagcctactttctgcagagtctctccagggccttgttgga 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggtatagtaaatgcttgccagagcctactttctgcagagtctctccagggccttgttgga 623

                                                                       
Query: 424 ttctgtccatccacaccccactccctgctcaggagtctggctttgtaacccttactggaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttctgtccatccacaccccactccctgctcaggagtctggctttgtaacccttactggaa 683

                                     
Query: 484 ctcaaattggaagaatattatgttag 509
           ||||||||||||||||||||||||||
Sbjct: 684 ctcaaattggaagaatattatgttag 709


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space:   448601
Effective search space used:   448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)