Query= MSMg01no341_m19.b1 MSMg01no341_m19.b1 CHROMAT_FILE:
MSMg01no341_m19.b1 PHD_FILE: MSMg01no341_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:08 2005
(482 letters)
>mm_chr13_88999827_89000709
Length = 883
Score = 888 bits (459), Expect = 0.0
Identities = 474/479 (98%), Gaps = 2/479 (0%)
Strand = Plus / Minus
Query: 6 gaattcttttgacgtgtcacataaaatgcattataattttgacctactgacccaaatact 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaattcttttgacgtgttacataaaatgcattataattttgacctactgacccaaatact 685
Query: 66 ttttaatgctatttaaatgttatgagaaaatataaaattttattttttctctctttgaga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttttaatgctatttaaatgttatgagaaaatataaaattttattttttctctctttgaga 625
Query: 126 ttcaatatattttattcaaatatttctttgctttgtttacacataaaataattttaatta 185
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttcaatatattttattcaagtatttctttgctttgtttacacataaaataattttaatta 565
Query: 186 aaataacttttttcactaggtttgaggaatacagcataaatatattattattctcacaat 245
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaataatttttttcactaggtttgaggaatacagcataaatatattattattctcacaat 505
Query: 246 ac-aaacatttcagctgttcacatgtctattaaatatatgatattttaaagactattaac 304
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acaaaacatttcagctgttcacatgtctattaaatatatgatattttaaagactattaac 445
Query: 305 tagaatgagtaggttgaaattgaaaagtatctcatatgcataatacattggctaaaataa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tagaatgagtaggttgaaattgaaaagtatctcatatgcataatacattggctaaaataa 385
Query: 365 atttaaataaatttgtttagctttgagacacttgaatggatctaacatagtttatagtta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atttaaataaatttgtttagctttgagacacttgaatggatctaacatagtttatagtta 325
Query: 425 tctgg-tttttttccttttttgaaaaagttttcatataattttattaaattcttttcag 482
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctggttttttttccttttttgaaaaagttttcatataattttattaaattcttttcag 266
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 883
Length adjustment: 10
Effective length of query: 472
Effective length of database: 873
Effective search space: 412056
Effective search space used: 412056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_m19.g1 MSMg01no341_m19.g1 CHROMAT_FILE:
MSMg01no341_m19.g1 PHD_FILE: MSMg01no341_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:08 2005
(207 letters)
>mm_chr13_88830668_88831274
Length = 607
Score = 393 bits (203), Expect = e-114
Identities = 206/207 (99%)
Strand = Plus / Plus
Query: 1 aaagttcaacaaaaatattcttcagaacaagcctggaacctctcaaagagcatcaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagttcaacaaaaatattcttcagaacaagcctggaacctctcaaagagcatcaaatgc 260
Query: 61 tcttcaccactaaagcataactccacaatcttggcatgatgaggaaattgctgcctagta 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 tcttcaccactaaagcataactccacaatcttggcatgatgaggtaattgctgcctagta 320
Query: 121 ctctgagaatgtgggctaagagtttaatgactgggttactttctgtgtgcatgtgtttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctgagaatgtgggctaagagtttaatgactgggttactttctgtgtgcatgtgtttgt 380
Query: 181 gtgtgtgtgtatgtgtgtgtgtgtgtg 207
|||||||||||||||||||||||||||
Sbjct: 381 gtgtgtgtgtatgtgtgtgtgtgtgtg 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 607
Length adjustment: 9
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
