Query= MSMg01no344_l22.b1 MSMg01no344_l22.b1 CHROMAT_FILE:
MSMg01no344_l22.b1 PHD_FILE: MSMg01no344_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:01 2005
(467 letters)
>mm_chr13_9646859_9647725
Length = 867
Score = 864 bits (447), Expect = 0.0
Identities = 459/463 (99%)
Strand = Plus / Minus
Query: 5 gaattcagatgcagatctcccacttggaaaccctcacgcctctgaccctggggcaacgta 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 667 gaattcagatgcagagctcccacttggaaaccctcacgcctctgaccctggggcaacgca 608
Query: 65 ttttgtcattttagtgctgtttctgagttagaaagtgctccagattgaacccgagcatct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ttttgtcattttagtgctgtttctgagttagaaagtgctccagattgaacccgagcatct 548
Query: 125 agaacctgattctgtggaggaaagtagtgaggggacaggcatttttattggtccccagcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 agaacctgattctgtggaggaaagtagtgaggggacaggcatttttattggtccccagcc 488
Query: 185 accatgtaaggggctttattgacacagcctctaacatctgtgatcaggtgagggtctaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 accatgtaaggggctttattgacacagcctctaacatctgtgatcaggtgagggtctaac 428
Query: 245 acaggctcatagccatctatgagagtgctgctgatattttagcacccattccatgaacta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 acaggctcatagccatctatgagagtgctgctgatattttagcacccattccatgaacta 368
Query: 305 cagggcatgagcagagtcccttacctctatgaactacttagcagcatatcacttttgatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cagggcatgagcagagtcccttacctctatgaactacttagcagcatatcacttttgatg 308
Query: 365 gcaaattgtaccaatcagagaaagctccagatatagaccaatattgggtaagggtataca 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 307 gcaaattgtaccaatcagagaaagctccagatatagaccaatattgggtaagggtatata 248
Query: 425 cacagctttgtgcgagtagggagtgatgactaccctgatctcc 467
||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 247 cacagctttgtacgagtagggagtgatgactaccctgatctcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_l22.g1 MSMg01no344_l22.g1 CHROMAT_FILE:
MSMg01no344_l22.g1 PHD_FILE: MSMg01no344_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:01 2005
(418 letters)
>mm_chr13_9452728_9453545
Length = 818
Score = 758 bits (392), Expect = 0.0
Identities = 411/418 (98%), Gaps = 2/418 (0%)
Strand = Plus / Plus
Query: 1 cagtcttctggagggagtagcaagtgcttttaactggtggggtggttttttttttttttt 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 203 cagtcttctggagggagtagcaagtgcttttaactggtggggtg--tttttttttttttt 260
Query: 61 ctatccttctatcttatttttttgagacagtctatcattgaacctggagctcactgttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatccttctatcttatttttttgagacagtctatcattgaacctggagctcactgttgg 320
Query: 121 ctagactgtgtaagcagaaagtcccagggactcttctgactctgttatccctaataccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctagactgtgtaagcagaaagtcccagggactcttctgactctgttatccctaataccat 380
Query: 181 gaagacccatcactgtgcctgccttaaagtgggtgtttgggatgtgaattgaggtcctca 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 gaagacccatcactgtgcctgccttaaagtgggtgttggggatgtgaattgaggtcctca 440
Query: 241 tgcttatatgcttgcactatttccttagatcgctgggtaggtagtaggttttgatgaccc 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcttatatgcaagcactatttccttagatcgctgggtaggtagtaggttttgatgaccc 500
Query: 301 tctgacatctcttacagttggtttagtggataggaatgggaagaagtgatggaatatact 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 tctgacatctcttacagttggtttagtggataggaatgggaagaagtgatcgaatatact 560
Query: 361 gtggcatgctatctttttctttcaaagctgatttaatcttcttgctgaattctgctgt 418
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 gtggcatgctatctttttctttcaaagttgatttaatcttcttgctgaattctgctgt 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
