Query= MSMg01no346_o02.b1 MSMg01no346_o02.b1 CHROMAT_FILE:
MSMg01no346_o02.b1 PHD_FILE: MSMg01no346_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:41 2005
(344 letters)
>mm_chr13_49883945_49884688
Length = 744
Score = 613 bits (317), Expect = e-180
Identities = 335/341 (98%)
Strand = Plus / Plus
Query: 1 agcctaccttttatagcagcagtttcctttctggtgttgctctgccccctctgcacatcc 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 agcctaccttttatagcagcagtttcctttctggtgttgttctgccccctctgcacatcc 260
Query: 61 tgccggttagaaataaaacaaatgagctggggtcccttcttcctttctcttttagacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccggttagaaataaaacaaatgagctggggtcccttcttcctttctcttttagacaag 320
Query: 121 cggcctgttatctgtgattgtgaatagcaagaaatccatattttccagggagtgctctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cggcctgttatctgtgattgtgaatagcaagaaatccatattttccagggagtgctctca 380
Query: 181 tccatccttgactcattcacaccgtgcataaacatagttcctcttgacctcattgggaaa 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccatccttgactcattcacactgtgcataaacatagttcctcttgacctcattgggaaa 440
Query: 241 atagcttatagggctgtctgtgccatgcttaccagggaagtcctcagtcagtgtacctca 300
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atagcagaaagggctgtctgtgccatgcttaccagggaagtcctcagtcagtgtacctca 500
Query: 301 gacaggatcttacccaaggctgagctctgcagctgcctctg 341
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 gacaggatcttacccaaggctgagctctgcaactgcctctg 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_o02.g1 MSMg01no346_o02.g1 CHROMAT_FILE:
MSMg01no346_o02.g1 PHD_FILE: MSMg01no346_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:41 2005
(502 letters)
>mm_chr13_50881421_50882322
Length = 902
Score = 930 bits (481), Expect = 0.0
Identities = 500/511 (97%), Gaps = 9/511 (1%)
Strand = Plus / Plus
Query: 1 catcatggcttctcagggatcttaaaagaaagatactctgactttgtcgttcacgaaatc 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 catcatggcttctcagggatcttaaaagaaaggtactctgactttgtcgttcacgaaatc 260
Query: 61 gggaaagatggacagatcaaccatttggatgacttatctgttccggtggacgaagacgac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 gggaaagatggacagatcaaccatttggatgacttatctgttccggtggacgaagaggac 320
Query: 121 cctccagaagatgctctcacagttttgacagctgaggacaggcaacagttggaggagctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctccagaagatgctctcacagttttgacagctgaggacaggcaacagttggaggagctc 380
Query: 181 cagcttttcaaaaataaagaaaccagtgttgccatcgaggtcattgaggacaccaaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagcttttcaaaaataaagaaaccagtgttgccatcgaggtcattgaggacaccaaagag 440
Query: 241 aagcaaacagtcatccatcaagccattaaatctctcttctcaggactagagacaaaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagcaaacagtcatccatcaagccattaaatctctcttctcaggactagagacaaaaaca 500
Query: 301 gaggatagagaggggcggaaatacatcgtagcctaccatgcagctggcaaaaaggctttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaggatagagaggggcggaaatacatcgtagcctaccatgcagctggcaaaaaggctttg 560
Query: 361 gcaaatccaaaaaacattcttggccaaaatcccggggaagttactgccactttgttctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcaaatccaaaaaacattcttggccaaaatcccggggaagttactgccactttgttctct 620
Query: 421 acaaggaaaaca----ta-----gataccatcaatgtcctatccaagtacctgcgggtaa 471
|||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaaggaaaacaaagataccatggataccatcaatgtcctatccaagtacctgcgggtaa 680
Query: 472 agccaaacatattctcctatgtgggaaccaa 502
|||||||||||||||||||||||||||||||
Sbjct: 681 agccaaacatattctcctatgtgggaaccaa 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
