Query= MSMg01no347_k09.b1 MSMg01no347_k09.b1 CHROMAT_FILE:
MSMg01no347_k09.b1 PHD_FILE: MSMg01no347_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:41 2005
(621 letters)
>mm_chr13_99414159_99415180
Length = 1022
Score = 1120 bits (579), Expect = 0.0
Identities = 603/611 (98%), Gaps = 1/611 (0%)
Strand = Plus / Minus
Query: 5 gaattctcattc-taccctgggctttgtgactctgagatgaaccagctaagttctcggta 63
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gaattctcattcaaaccctgggctttgtgactctgagatgaaccagctaagttctcggta 552
Query: 64 gctcatcactgcctccgttctttcctgagaggctcccagccgtaactgcaccactaattc 123
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gctcgtcactgcctccgttctttcctgagaggctcccagccgtaactgcaccactaattc 492
Query: 124 ttgtccaagtattgagttaaagtgggtgaattttggaaggatgacataaaataaaataaa 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 491 ttgtccaagtattgagttaaagtgggtgaattttggaaggatgacataaaataaaaaaaa 432
Query: 184 aaaaaggaaataaagctgaaggatcataaagttaatgtggtctttttatgtgaagaggca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aaaaaggaaataaagctgaaggatcataaagttaatgtggtctttttatgtgaagaggca 372
Query: 244 gaaggtgagtccatcctggtgtaagccagttagttacccagcagataaaacaccatctgg 303
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gaaggtaagtccatcctggtgtaagccagttagttacccagcagataaaacaccatctgg 312
Query: 304 aattgtctccttacaaaggaagagaccctgctctctacatgtatctacaaaaagacttag 363
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aattggctccttgcaaaggaagagaccctgctctctacatgtatctacaaaaagacttag 252
Query: 364 gtcaagggcagacaaagtgaaaagggagttctcaccaaaatgtacagttttgtttgcttg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gtcaagggcagacaaagtgaaaagggagttctcaccaaaatgtacagttttgtttgcttg 192
Query: 424 agacagggtcttgtttagaccaggctggcctcaaactccttaagtacccaaggatgactt 483
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 191 agacagggtcttgtttagaccaggctggcctcaaactccttaagtagccaaggatgactt 132
Query: 484 taaaatattcttcttcctgcctctacctcccgagtgctgggattacaggcaggtgccacc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 taaaatattcttcttcctgcctctacctcccgagtgctgggattacaggcaggtgccacc 72
Query: 544 tggccccgcatcttataggtggatttaaatgtgcttcaggggctgtttctgaaacattgc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tggccccgcatcttataggtggatttaaatgtgcttcaggggctgtttctgaaacattgc 12
Query: 604 aaaagactatt 614
|||||||||||
Sbjct: 11 aaaagactatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1022
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1012
Effective search space: 618332
Effective search space used: 618332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_k09.g1 MSMg01no347_k09.g1 CHROMAT_FILE:
MSMg01no347_k09.g1 PHD_FILE: MSMg01no347_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:41 2005
(516 letters)
>mm_chr13_99319971_99320886
Length = 916
Score = 990 bits (512), Expect = 0.0
Identities = 515/516 (99%)
Strand = Plus / Plus
Query: 1 tttggctgcacacctaatattaacttaagggtcatcttgcaaatgctcaaagtggagggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttggctgcacacctaatattaacttaagggtcatcttgcaaatgctcaaagtggagggt 260
Query: 61 ggtaacaccaaaatgtcaccagctgaacctcaataagtcaattcttaacaacatggagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtaacaccaaaatgtcaccagctgaacctcaataagtcaattcttaacaacatggagca 320
Query: 121 cagcccatcatctgcagaaagcttcaccaccatggctgggctggagggtcacagctgtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagcccatcatctgcagaaagcttcaccaccatggctgggctggagggtcacagctgtac 380
Query: 181 gtgagctcctatcatctctccatgttcctgctctaaccacgctgtagtaatgcattttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgagctcctatcatctctccatgttcctgctctaaccacgctgtagtaatgcattttat 440
Query: 241 gtgcctccatgggtcagtggtggcataaaatagtgtttatttgcttctactttgtggtag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgcctccatgggtcagtggtggcataaaatagtgtttatttgcttctactttgtggtag 500
Query: 301 cagaataaaacccatcgggaccatgcttgtcagcccccggcacaaccgccatgacatttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagaataaaacccatcgggaccatgcttgtcagcccccggcacaaccgccatgacatttc 560
Query: 361 ctgtatcacattatcaagcatctctgtggaaaatggacttttattgcttaaccatgcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtatcacattatcaagcatctctgtggaaaatggacttttattgcttaaccatgcctt 620
Query: 421 gtcccccactgtgcccctccagtgaccatacatcactgtcaggacatgcctgtaagccca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtcccccactgtgcccctccagtgaccatacatcactgtcaggacatgcctgtaagccca 680
Query: 481 gatgggtgggagaggaggggtgactgttggctagct 516
|||||||||||||| |||||||||||||||||||||
Sbjct: 681 gatgggtgggagagaaggggtgactgttggctagct 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
