Query= MSMg01no349_k23.b1 MSMg01no349_k23.b1 CHROMAT_FILE:
MSMg01no349_k23.b1 PHD_FILE: MSMg01no349_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:22 2005
(648 letters)
>mm_chr13_95108251_95109297
Length = 1047
Score = 804 bits (416), Expect = 0.0
Identities = 440/448 (98%), Gaps = 1/448 (0%)
Strand = Plus / Minus
Query: 200 agtagctaaaagctcacaatttgagacataaccacgggcagagagatacactggaatggt 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 agtagctaaaagctcacaatttgagacataaccacgggcagagagatacactggaatggt 988
Query: 260 gaaacttcaaacactgctcccagtgacatatttccttcaacaaggccatgcctcccaatc 319
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 987 gaaacttcaaacactgctcccagtgacacatttccttcaacaaggccgtgcctcccaatc 928
Query: 320 cttcccaaatagtttcactagttaaggactgagtgttcaaacatatgagcctataaggcc 379
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 927 cttcccaaatagtttcactagttaaggactgggtgttcaaacatatgagcctataaagcc 868
Query: 380 actctcattcaacccaccacagtgtgcacacactggaaactaatctgaatgtctccattt 439
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 actctcattcaactcaccacagtgtgcacacactggaaactaatctgaatgtctccattt 808
Query: 440 agattataaattctccaagagcaaggacaatatcttaagccccgttgtggcttgcagaat 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 agattataaattctccaagagcaaggacaatatcttaagccccgttgtggcttgcagaat 748
Query: 500 gccctacagattcaataaaagatatcatgaacatatttgcaataaagatgatgctgatga 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gccctacagattcaataaaagatatcatgaacatatttgcaataaagatgatgctgatga 688
Query: 560 taatttattggaataaaaacatcagaaatggcaaaaatctgccaactgaacagaattttg 619
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||
Sbjct: 687 taatttattggaataaaaacatcagaaatggccaaa-tctgccaactgaacagaaatttg 629
Query: 620 ggaagataataaatttctgtatagcttc 647
||||||||||||||||||||||||||||
Sbjct: 628 ggaagataataaatttctgtatagcttc 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1047
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1037
Effective search space: 661606
Effective search space used: 661606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_k23.g1 MSMg01no349_k23.g1 CHROMAT_FILE:
MSMg01no349_k23.g1 PHD_FILE: MSMg01no349_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:22 2005
(458 letters)
>mm_chr13_95022619_95023474
Length = 856
Score = 855 bits (442), Expect = 0.0
Identities = 454/458 (99%), Gaps = 2/458 (0%)
Strand = Plus / Plus
Query: 1 taactaacacatccacacaggttgttttacactcacttactccaccagctgaaaaagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taactaacacatccacacaggttgttttacactcacttactccaccagctgaaaaagagt 260
Query: 61 agttaaaatgtcccctatttaacttccatttaaacacttaagagaagtacaaaaaataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttaaaatgtcccctatttaacttccatttaaacacttaagagaagtacaaaaaataaa 320
Query: 121 tcatgctaccgtgcgagagtcggagaaagggttgtattcatcaagtcccggtggcacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatgctaccgtgcgagagtcggagaaagggttgtattcatcaagtcccggtggcacatt 380
Query: 181 tcttgtcacctgtgtgacagatgggtcctggaaaaagaattgaaagagaaaaaaatatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 381 tcttgtcacctgtgtgacagatgggtcctggaaaaagaattgaaagagaaaaaaa-a-at 438
Query: 241 atgagttaataattaagacacaattttgatatttacatactacttgctttatctgaacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atgagttaataattaagacacaattttgatatttacatactacttgctttatctgaacct 498
Query: 301 ttggtctcagcaaaacaaagcaaactgaaagtactgtcagatatattcaacatttcaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttggtctcagcaaaacaaagcaaactgaaagtactgtcagatatattcaacatttcaaca 558
Query: 361 aaggtaatatttaagccggcagccctcacaccctcagagaaaaacaaataaaacatgagt 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 559 aaggtaatatttaagccggcagccctcacaccctcaaagaaaaacaaataaaacatgagt 618
Query: 421 taggcgcaagtcagctgctagtcggtctataaagatcg 458
|||||||||||||||||||||||||| |||||||||||
Sbjct: 619 taggcgcaagtcagctgctagtcggtatataaagatcg 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 856
Length adjustment: 10
Effective length of query: 448
Effective length of database: 846
Effective search space: 379008
Effective search space used: 379008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
